Amaranthus tricolor (tampala): 130816061
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Entry
130816061 CDS
T09367
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
atri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130816061
03460 Fanconi anemia pathway
130816061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atri03032
]
130816061
03400 DNA repair and recombination proteins [BR:
atri03400
]
130816061
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130816061
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130816061
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
130816061
Bloom's syndrome complex (BTR)
130816061
FA (Fanconi anemia) pathway
130816061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
130816061
NCBI-ProteinID:
XP_057538625
LinkDB
All DBs
Position
6:complement(21740992..21760726)
Genome browser
AA seq
725 aa
AA seq
DB search
MMKKSPLPVQNICGTPKNICSKEDLVKILRWHFGHSEFRGKQLEAIEAVLSGRDCFCLMP
TGGGKSMCYQIPALAKHGIVLVVCPLIALMENQVKALKEKGIGAEYLSSTQSSHVKERIY
DDLNSGKSSLKLLYVTPELIATTGFSSKLSKIHSRGLLHLIAIDEAHCISSWGHDFRPSY
RKLSSLRDILPDVPILALTATAAPKVQSDVIASLSLRNPLVLKSSFNRPNIYYEVRYKDL
LDDSYADLCGVFKSCGEVCGIIYCLERSACDALATHLSSYGISCAAYHAGLNNKVRSSVL
DDWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPCRSVLY
YSIDDRKRMEFILKNPQSKKSEPSRFVDLSSKKPLDDFRQMIEYCEGSDCRRKKILQSFG
EQALASLCGKTCDACKQPNVVAKHLEQLSSSATLQKNLVARVFVNSSMNNIGGEQSSEFW
NRSDDESYGSEEEISDSDDDIEVSKGLSCSRLPSRLNEKLDILQRAEEKYYQCGGSQEQT
SRKDKNSISYTLRESCKQKLLNALKETQRKLGRFDIESAVTILESECYKKCVKSGKSFYI
SQMAGTVRWLSTVSLTDLTHRLQPDSPNMKNLKPEDSIQKPTSPSIDSNKAIKAIVHAKT
IVDPLPSSAQTSDSVARKIILPPIPSFSDFVRSTKPKISQAIHRSDSKRNSTDVSGTADK
RKRLQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaatcaccattacctgtgcaaaatatttgtggcacaccgaagaatatttgt
agcaaggaagatctggtcaaaatcttgagatggcattttgggcattctgaatttcgtggc
aagcaactggaggctattgaagctgttttgtcaggaagagattgtttttgtcttatgccc
actggaggaggaaagtctatgtgttatcagattcctgctctcgcaaaacatgggatagtc
cttgttgtttgtccgctaatagctttgatggaaaaccaagtgaaggctttgaaggaaaag
ggcattggagccgaatatctctcctcaactcaatcatcccatgtcaaggagaggatttat
gacgacttgaactctggaaaatcttccttgaagctgttgtacgtgacaccagagttgata
gcaacaacaggttttagctcaaaactctctaaaattcacagccgggggttattgcatttg
attgccatagatgaggcacattgcatttcaagttggggtcatgacttcaggccaagctac
aggaaactatcctctttgagagacatccttccagatgttccaattttagcattgacggca
actgctgcaccaaaggttcagagtgatgtgattgcatcattaagtttgcgaaatcctctt
gtcctaaaatcatcttttaatcgcccgaatatatactatgaagttcggtataaagatctt
ctggatgatagttatgctgatttatgtggggtttttaagtcctgcggggaagtttgtggc
ataatttactgccttgaaagatcagcttgtgatgccttggctactcacctatcgagttat
gggatatcatgtgctgcttatcacgcaggtttgaacaataaagtacgaagctccgtctta
gatgattggatttcttcgaagatacaagttgttgtcgcaacagtagcctttgggatggga
attgatagaaaggatgttcgaattgtctgtcacttcaatatccctaagtcgatggaagca
ttttatcaagagtctggaagagctggacgtgaccaattaccgtgtcgaagtgtcctttac
tatagcattgatgatcgcaagagaatggaatttattttgaaaaatcctcaaagcaagaaa
tcggagccctcacgcttcgtagatttgtcgtcaaagaagcctctggacgatttcagacag
atgatcgagtactgtgaaggttctgattgtcgtagaaaaaaaattcttcaaagttttggg
gaacaggcacttgcttctctctgtggtaaaacatgtgatgcctgcaaacagccaaatgta
gttgccaagcaccttgagcagttgagttcctcagccactctacaaaaaaacctggtggct
cgagtttttgtgaacagttccatgaacaatattggtggagaacaatcaagtgagttttgg
aatcgtagtgatgatgaatcatatggttctgaggaagaaatatctgattctgatgatgat
attgaagtgtcaaagggcctaagctgctcaagattaccatcaagattaaacgagaaactt
gatatattgcagcgagcagaagaaaaatattatcagtgcggaggctctcaagagcagact
agtagaaaagacaagaattcaatatcttacacattaagagagtcatgcaagcaaaaactg
ttaaatgctttaaaagagactcaacgaaaacttggcaggtttgacatcgaatcagctgtc
accatccttgaaagtgaatgctacaagaaatgtgtaaagagcgggaaatcattttatatt
tcacagatggctggtacagtacggtggctatcaactgtaagtttaactgatttaacccac
aggctgcagcccgactcaccaaatatgaagaacttgaagccagaggactctattcaaaag
ccgacttccccctcaattgactctaataaagctataaaggcaatcgtccatgcaaaaact
atagtagatccactgccttcgtctgcacaaacatcagatagtgtagctcgtaaaataatt
ttacctccaattccatccttctctgactttgtgaggagcaccaaaccgaaaattagtcaa
gccatccatcgttccgattcaaaaaggaattcaacagatgtttccggtacagcagataag
aggaagaggttgcaatag
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