KEGG   Amaranthus tricolor (tampala): 130816097
Entry
130816097         CDS       T09367                                 
Name
(RefSeq) SKP1-like protein 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03083  Polycomb repressive complex
atri04120  Ubiquitin mediated proteolysis
atri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130816097
   04120 Ubiquitin mediated proteolysis
    130816097
  09126 Chromosome
   03083 Polycomb repressive complex
    130816097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130816097
   04121 Ubiquitin system [BR:atri04121]
    130816097
   03036 Chromosome and associated proteins [BR:atri03036]
    130816097
Membrane trafficking [BR:atri04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    130816097
Ubiquitin system [BR:atri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     130816097
   Cul7 complex
     130816097
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     130816097
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     130816097
SSDB
Motif
Pfam: Skp1 Skp1_POZ DEAD BTB AAA_22
Other DBs
NCBI-GeneID: 130816097
NCBI-ProteinID: XP_057538673
LinkDB
Position
1:37380000..37388414
AA seq 243 aa
MLEKHALDLGAMRVLVIDEVDFMFNSARQVSSLRKLLTSYSSCQSRQTVFASASIPQHRH
FLHECVQQKWTKSNVVHVHVNPVEPMPARLHHRFMVITLRSSDGQTFDVEANIVGSQSPL
IKNLIENHIDTNGVTPLKVRADILTHILNYCKKHAKQDPPINDEELKKWDEEFIKCNQSI
LFDLIMAANYLLMDSLIDLTCQTVADMIKDKSVEEIREVFQIKNDFKPEEEEQVRNENSW
VFE
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcttgagaaacatgctttagatcttggcgcaatgagagttctcgtaattgatgaggtt
gacttcatgtttaattccgccagacaagttagttccctgcgaaaattgctaacatcttat
tcatcatgtcaatctcgccaaactgtatttgccagtgcatcgattcctcagcataggcac
tttctgcatgagtgtgtacagcagaaatggaccaaaagcaatgttgtccatgtccatgtt
aatccagttgaaccgatgcctgcacgcctgcatcatagatttatggtaataactctaagg
agttcagatggacagacatttgatgtggaagcaaacatcgtcggatcgcaaagtccattg
attaagaaccttatcgagaatcacatcgacaccaatggtgttacaccgcttaaagttcgt
gcagacattctgacgcacattctcaattactgcaaaaaacacgcaaaacaggatccacct
ataaatgatgaagaactcaagaaatgggacgaagaattcatcaaatgtaatcagagtatc
ttgtttgatctgattatggctgctaactatcttcttatggattctttgattgatttgact
tgccaaacagtggccgacatgattaaagataaatctgtggaggaaatcagggaagttttc
caaatcaagaatgattttaaacctgaagaagaggaacaagtacgaaatgagaattcatgg
gtattcgagtga

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