Amaranthus tricolor (tampala): 130816097
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Entry
130816097 CDS
T09367
Name
(RefSeq) SKP1-like protein 12
KO
K03094
S-phase kinase-associated protein 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03083
Polycomb repressive complex
atri04120
Ubiquitin mediated proteolysis
atri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130816097
04120 Ubiquitin mediated proteolysis
130816097
09126 Chromosome
03083 Polycomb repressive complex
130816097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130816097
04121 Ubiquitin system [BR:
atri04121
]
130816097
03036 Chromosome and associated proteins [BR:
atri03036
]
130816097
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
130816097
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
130816097
Cul7 complex
130816097
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130816097
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
130816097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
DEAD
BTB
AAA_22
Motif
Other DBs
NCBI-GeneID:
130816097
NCBI-ProteinID:
XP_057538673
LinkDB
All DBs
Position
1:37380000..37388414
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AA seq
243 aa
AA seq
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MLEKHALDLGAMRVLVIDEVDFMFNSARQVSSLRKLLTSYSSCQSRQTVFASASIPQHRH
FLHECVQQKWTKSNVVHVHVNPVEPMPARLHHRFMVITLRSSDGQTFDVEANIVGSQSPL
IKNLIENHIDTNGVTPLKVRADILTHILNYCKKHAKQDPPINDEELKKWDEEFIKCNQSI
LFDLIMAANYLLMDSLIDLTCQTVADMIKDKSVEEIREVFQIKNDFKPEEEEQVRNENSW
VFE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagaaacatgctttagatcttggcgcaatgagagttctcgtaattgatgaggtt
gacttcatgtttaattccgccagacaagttagttccctgcgaaaattgctaacatcttat
tcatcatgtcaatctcgccaaactgtatttgccagtgcatcgattcctcagcataggcac
tttctgcatgagtgtgtacagcagaaatggaccaaaagcaatgttgtccatgtccatgtt
aatccagttgaaccgatgcctgcacgcctgcatcatagatttatggtaataactctaagg
agttcagatggacagacatttgatgtggaagcaaacatcgtcggatcgcaaagtccattg
attaagaaccttatcgagaatcacatcgacaccaatggtgttacaccgcttaaagttcgt
gcagacattctgacgcacattctcaattactgcaaaaaacacgcaaaacaggatccacct
ataaatgatgaagaactcaagaaatgggacgaagaattcatcaaatgtaatcagagtatc
ttgtttgatctgattatggctgctaactatcttcttatggattctttgattgatttgact
tgccaaacagtggccgacatgattaaagataaatctgtggaggaaatcagggaagttttc
caaatcaagaatgattttaaacctgaagaagaggaacaagtacgaaatgagaattcatgg
gtattcgagtga
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