Amaranthus tricolor (tampala): 130816900
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Entry
130816900 CDS
T09367
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
atri04145
Phagosome
atri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130816900
04145 Phagosome
130816900
04148 Efferocytosis
130816900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130816900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130816900
04031 GTP-binding proteins [BR:
atri04031
]
130816900
Membrane trafficking [BR:
atri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
130816900
Endosome - Lysosome transport
130816900
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130816900
Exosomal proteins of other body fluids (saliva and urine)
130816900
Exosomal proteins of colorectal cancer cells
130816900
Exosomal proteins of bladder cancer cells
130816900
GTP-binding proteins [BR:
atri04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
130816900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130816900
NCBI-ProteinID:
XP_057538862
LinkDB
All DBs
Position
1:complement(37920005..37926517)
Genome browser
AA seq
200 aa
AA seq
DB search
MGCSSSVPDRTTRGRIGLNPGTEPASDAKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPES
FTKAQYWVKELQKHGSPDIVMALVGNKADLHERRDVPTQEGIEYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPDSS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcttcctcagtacctgatagaactactagaggacggattggtcttaatcct
ggcactgagcctgcatctgatgccaaaaacttaaaagttaagcttgtgcttcttggagat
tctggtgttggaaaaagctgtattgttcttcgttttgtgcgtggtcagtttgatcctact
tccaaggtgactgttggagcatcttttctctctcaaacaatagcattacaggattcaact
actgttaaatttgaaatatgggatactgctggtcaagagaggtatgctgcgcttgctccc
ctttattatcgaggagctgcagttgcagttattgtatatgatataacaagtcctgaatct
tttacaaaagcgcaatattgggtaaaggaattgcaaaagcatgggagtcctgacatagtc
atggctttggttggaaacaaagctgatcttcatgaacgcagagatgtacctacgcaggag
gggattgaatatgcagaaaagaatggaatgttttttattgagacctccgcaaagactgct
gataacataaatcaattgtttgaggaaattgccaaacgactaccccggcctgattcgtca
taa
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