Amaranthus tricolor (tampala): 130817293
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Entry
130817293 CDS
T09367
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130817293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130817293
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130817293
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130817293
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130817293
Exosomal proteins of colorectal cancer cells
130817293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
MKT1_C
Motif
Other DBs
NCBI-GeneID:
130817293
NCBI-ProteinID:
XP_057538899
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All DBs
Position
7:26729776..26737744
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AA seq
423 aa
AA seq
DB search
MAGKWLPSAELTTSGRPLLSSDEVECFLLSSVDIEPNFSTHPNLSPLTSGLLTLTTHRLI
WISSNDAVSIPLAQITHIFTMKKSLKSMLSISSPRVKFELSLPSIGSVMVTLVMRGKSDN
HELFYEKLWEAWRGRNWEKSDGGLPEERQNSVAIKVPVVGVSGILRKEQEIWESTDKTLQ
DAFQDLNALMSKAREMVLLSEKMRQKLLAGTNSHSSTSGDEEMGSKEEMQDWLLSVGIIS
PVTKESAGALYHQQLSRQLADFVKVPLDRAGGMINLIDIYCLFNRARGTELISPDDLLRA
CTLWEKLDVPMILRKFDSGVMVIQSKSHSDDEIFGRIRTLVLKPEALRTGISASDAAMAL
GIAPAMAKEHLLAAEGKGLLCRDTSPDGFRFFVNLFPEINLDDIYLVRSDGIYASWIAAV
IAS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaatggctaccatcagcagagctaaccacaagtggaagacccttactttcc
tccgacgaagttgaatgcttccttctctcctccgtcgacatcgaacccaacttttcaacc
cacccaaatctctctcctttgacctctggtcttcttactttgaccacccatcgcctcatt
tggatctcctccaatgacgccgtctcaatcccacttgctcaaatcacccatatcttcacc
atgaaaaaatcccttaaatccatgctgtcaatatccagtcctagagtcaagttcgagcta
tctcttccgtcaattgggtcggtcatggtgacgcttgtaatgagggggaaatctgataat
catgaattgttttatgaaaagctttgggaagcttggaggggaagaaattgggagaagtct
gatggtgggttgccggaggagagacaaaatagtgttgcgattaaggtgcctgtggttggg
gtttctggaatacttaggaaagaacaggaaatatgggaaagtactgataaaactctgcaa
gatgcttttcaggacttgaatgctctaatgagcaaagctagggagatggtgctgttgtct
gagaaaatgaggcaaaaactcttagcagggacaaatagtcactccagtacttctggtgat
gaggagatgggctccaaagaagagatgcaagattggttgctcagtgttggtatcatatca
ccagtaacaaaagaatctgctggtgccttgtatcatcagcagttgtctcgccagttagca
gattttgtcaaggttccactggatagagctggaggaatgattaatcttattgatatctat
tgccttttcaatcgtgcacgtggaacagaactgatatcgcctgatgatttattgcgagct
tgcactctttgggagaagcttgatgttcccatgatcctgcggaagttcgatagtggtgtt
atggtcattcaaagcaaatctcacagtgatgatgagatttttggtagaatcagaactctt
gtactaaaacctgaagccctccgaactggaataagtgcaagtgatgctgcaatggccctg
ggaatagctccagcaatggccaaggaacatcttctcgctgctgaaggcaaaggtctgctt
tgcagggatactagtccagatggcttcaggttttttgttaatctctttccagaaattaac
ctggatgatatatacttggtgagaagcgatggtatttatgcttcatggattgctgctgtc
atagcatcgtaa
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