Amaranthus tricolor (tampala): 130817340
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Entry
130817340 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130817340
KO
K12864
beta-catenin-like protein 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130817340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130817340
Spliceosome [BR:
atri03041
]
Complex B
Other components
Prp19 complex
130817340
Complex C
Prp19-CDC5 complex
130817340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNBL
ARM_ARMC5
HHD_RTEL1
Phage_holin_3_3
Motif
Other DBs
NCBI-GeneID:
130817340
NCBI-ProteinID:
XP_057538959
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All DBs
Position
7:complement(27225641..27235806)
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AA seq
573 aa
AA seq
DB search
MGQVGAGHSIQLSASLLPFGVQNKLSYISSSLLSNLGTLKTIQKMEVANSRSNNSSSLKR
RREEDDDFQNSIDNGIDFSLLEALEKSQSIVETLDLKTLKKLVLSFERRLRDNIEARLKY
SDQPEKFADSEVELHEELQKLKVLAGGPELYPELVNLNTIPSILGLLSHDNTDIAIDVVS
LLHDLTEEDILEDNDEPAKVLVDSLIENSGLELLVTNLLRLNENDPDEGGAIHTTLATLE
NLIEVKPAVAEIVCEKTKLLRWLLGKIKVKEFDGNKEYASEILAILLQNSTANQKRLGQM
NGVDVMLQAVAMYKSKDPKSPEEEEMVENLFDCLCCLLMPLENKERFVKAEGVELMIIIM
KQKKLAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPISKKNKKERYKEEL
EERIISLISSLFAGILRGSRRERLLSKFVENECEKIDRLIELYVRYSDRVKAETERLSEL
ELDLEMDEEERYNRKLDSGLYTLQLIAVILGHLWTSENARMRARIELLLRQHKLTKNDVK
DILQEYHDNIGDLDGPEEKERAQSKIQKFLSAF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagttggagcggggcacagcattcagctttcagcatctcttcttccgtttggt
gttcagaacaaactcagttacatttcaagcagtttattatctaatcttggaacactaaaa
actatccaaaaaatggaggtagcaaattctcgcagcaacaattcttcatccctcaaacgc
cgacgagaagaggatgacgacttccaaaactccattgataatggtatcgatttctcccta
cttgaagccctagaaaagtctcagtcaatcgtcgaaaccctcgacctcaaaaccctaaaa
aaactcgtcctttctttcgagcggcgtcttcgcgacaacatcgaagctcgtctcaagtac
tctgatcaacctgaaaagttcgccgattctgaggttgaactccatgaagagcttcaaaaa
ctcaaagttcttgctggaggtcccgaactttaccccgagttggtaaacttaaacacgatt
ccttcaattcttggattattaagccatgataatactgatattgctatcgacgttgtttct
ctccttcatgatttaactgaggaggatattttagaggataatgatgaacctgccaaggta
ttagttgatagtttgattgaaaacagtggtctggaattactagtgacgaatttgttgagg
ttaaatgagaatgatcctgatgaagggggtgctattcatactactttagctacgctggag
aatttgatagaggttaagcctgcagtggcggagattgtttgtgagaagacgaaattgtta
aggtggttgttagggaagattaaggtgaaagaatttgatggaaataaagagtatgcgtcc
gagatcctggcgattttgttacagaatagtactgcgaatcagaaacgattggggcagatg
aatggtgtggatgttatgttgcaggcggtggcaatgtataagtctaaggatcccaagagt
cccgaggaggaggagatggtagagaatttgtttgattgtttgtgttgtttgttaatgcct
ttagagaataaggagagatttgtgaaggctgaaggggttgaattgatgatcattataatg
aaacagaaaaaattggcatatgggtctgctattagggcacttgattttgccatgactaag
tatcctccagcttgtgagcgttttgtggatgttttggggttgaaaactgcttttgctgct
ttcatgggtaagataccaattagcaagaagaacaagaaagaacgatacaaggaagagcta
gaggagcggataatatcacttatttcatcgttatttgcggggatcttgaggggatctaga
agagaaagattgttgagcaaatttgtggaaaatgagtgcgagaagatagacaggcttata
gaactttacgtaagatattctgatagagttaaagccgagactgaacgcctgagcgaactg
gaacttgatcttgagatggatgaggaggaaaggtacaacaggaagctagattctggtctt
tacactcttcagctgattgctgttattttagggcatctttggacctctgagaatgcacgg
atgagagcaagaattgaacttttacttaggcagcataagctcacaaagaatgatgtgaag
gatatacttcaggaatatcatgacaacattggagaccttgacggaccagaggaaaaggaa
cgtgctcagtcgaaaatacagaagtttttatctgccttttga
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