Amaranthus tricolor (tampala): 130817343
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Entry
130817343 CDS
T09367
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atri03000
]
130817343
03036 Chromosome and associated proteins [BR:
atri03036
]
130817343
Transcription factors [BR:
atri03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130817343
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130817343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADAMTS_CR_3
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
130817343
NCBI-ProteinID:
XP_057538967
LinkDB
All DBs
Position
7:complement(7713392..7741217)
Genome browser
AA seq
1484 aa
AA seq
DB search
MEVKPNENEAEDNDAKVDEDDVVSEDSFLEDLSEEEDDQFIEGSEPQHEGPLTEEEIEEL
VNELLEVESKAAEAQEALEEESLQTVEKEVREELASNLHGDDLSKAVAEEMVTFKEEWEA
TLDDLETQSAELLEQLDGAGIDLPSIYKWIESKAPNGCCTEAWKKRTHWVGIEAAIDALE
SVKNAEKQLQILRPVRRKHGKTLEEGASGYLAKKICANNNGEGLTINSMVEWKSFNKLFS
DHPSKEDIAFGSKQWASVYLASTPQQAAAMGLEFPGVDEVEEIDDIDDDPSDPFVADAIA
NEQELDLSEVQRKNYKKVKEEDDLNFVQKHQFQLKRKRRQKRSKQKSMVGSLQKDQSCFH
SRHDEGVLIGDKGDKCQDSTNEELANCGLSPCLQEEEAYSNIDSSEHFLPQSVEPSCGSK
RLFEDEGLDHEAKRSRIDMESDNGAQTLNHDFIGDCESNDILVEEESFVEENGDDPLKVD
RSSENVYDQFYCTACKKATKEIHEHPLLKVIVCGQCQCLIKEKLMDSQNLENFCRWCGGS
NDLLSCKSCELRFCMPCVKRNLGVECLPEEATLYGWQCCSCSPDLLQKLTLELEKAIGSQ
DLLVSSSESETDDSEYEIGVSISSRKAQKKKIRRILDDTELGEETKRKIALEKERQERLK
SLKAQFSSIPMMMSASSCNVNLLEGATSEVLGDASTGFIVNVVREEGEDAVRIPPSISAK
LKTHQVAGIRFMWENIIQCIRNVKAGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLG
LKTALVVAPVNVLHNWKHEFNKWEPKEFKPLRVYMLEDKSREQQRAELLMKWRRKGGVFL
IGYNSFRNLSLAKNMKDLKSAAEICSALQDGPDILVCDEAHIIKNTKAEITQVLKLVKCQ
RRIALTGSPLQNNLMEYYCMVDFVREGFLGSMHEFRNRFQNPIEFGQHANSTAEDVRIMN
QRSHILYEQLKGFVQRMDMSVAKKDLPPKTVFVIAVKPSSLQKKLYKRFLDVHVFSHKAS
SEGTRKHFFAAYQTLAQICNHPWILRLMKDKGYAKREDTPDDISSDENMDSNLGIGEKTK
AKIDKGFLHEGWWNSLLNQYHQWEIEYSGKMVLLLDILTMSTKLGDKALVFSQSIATLDL
IESYLSKLSQPSKGKLWKRGKDWYRIDGRTDGFERQKLVDAFNNPQNGRVKCTLISTRAG
AMGINLFAANRVIIIDGSWNPTYDLQAIYRAWRYGQKKPVYAYRLVAHGTIEEKIYKRQV
KKEGLAARVVDRQQVLRSMSKEEISDLFNFDDDENLDVLSELNAKSGHLADLDNCKNVVD
SSKLSSDCPRSCASDKLMETLLDQHRLRWIMNFHEHETLLQENEEEKLTKEEQDLAWEVF
KRSIDRQEVQKVPADFEWQEVSRVPPDVTFEQKQSSLNANILEERTGTTNPLANVPTRYN
MPARRCTNISHLYILKSQGIKVGSSTICGECGQDISWEYLNRGS
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaacctaatgagaatgaggcggaagataatgatgccaaagtagatgaagat
gatgtggtttctgaggattcttttttggaggatttaagcgaggaggaagacgaccagttc
attgaaggaagtgaaccacaacatgagggccctttgaccgaagaggagattgaagaatta
gttaatgaattactcgaagtagagagtaaggcggccgaggcacaagaagcacttgaagaa
gagtctctgcaaacggttgaaaaagaagtgagagaagagttagctagtaatctacatggc
gatgatttatcgaaggctgtggctgaggaaatggttacttttaaagaagaatgggaggca
actcttgacgaccttgagacacaaagtgctgagttgttggagcaacttgatggtgctggt
attgatctaccaagtatctataaatggattgagagcaaggctccaaatggttgttgtact
gaagcttggaagaaaaggacacattgggtaggaattgaggctgccattgatgctctagaa
tccgttaagaatgctgaaaagcaacttcagatacttaggcctgtaaggagaaaacatggc
aaaactttggaggaaggagctagtggatatctagcgaaaaaaatatgtgcaaataataac
ggtgaaggtttgacaattaactctatggtagagtggaaatcatttaacaagttattttct
gatcatccttccaaggaagacattgcctttggtagcaagcaatgggcttctgtatacttg
gcgagtactcctcaacaggctgcagctatgggacttgaatttcctggggttgatgaggtc
gaagagatagatgacatagatgatgatccaagtgatccttttgttgctgatgctatagcg
aatgaacaagagttggatctttctgaagtgcaacgaaaaaattacaaaaaggttaaagag
gaagatgatctgaattttgttcaaaaacatcaatttcaattgaagcgaaagaggcgtcag
aaaaggagtaaacagaaatctatggtagggtctttacaaaaagaccaatcttgttttcac
tccagacatgacgaaggtgtattaattggtgataaaggggacaagtgccaagattcgacg
aatgaggagcttgctaattgtggactttcgccttgtcttcaagaggaagaagcttactct
aatatcgattcttctgagcatttcttgcctcagtcagttgaaccctcttgtggttccaag
cgtttatttgaggatgaggggttggaccatgaagctaagagaagtcgaattgatatggag
agtgataatggagctcaaactttgaaccatgattttattggtgactgtgagtcaaatgac
attttagtggaggaagaatcctttgttgaagaaaacggtgatgatcctttgaaggttgat
agatcttcagaaaatgtctatgatcagttctactgtactgcttgcaagaaggcgacaaag
gagatacacgagcatcctcttctgaaagtgattgtttgtggacaatgccaatgtcttatt
aaggaaaagttgatggattcccaaaatttggaaaatttttgtagatggtgtggaggtagt
aatgatttgttgtcttgtaaatcatgtgaactccgattttgtatgccatgtgtaaagagg
aatcttggagtggaatgcttgccagaagaggctacactttatggatggcaatgctgttct
tgttctccagatctcttgcagaagttgaccttggaacttgagaaagccattggctcccaa
gatttattagtttctagttctgaaagtgaaacagatgattcagagtatgagattggtgtc
tctatcagctcccgcaaggcacaaaaaaagaaaattcgaaggattttagatgatacagaa
ttaggagaagagacgaagaggaaaattgctttggaaaaggaacgtcaggaacgacttaag
tctctcaaagcgcagttttcaagcatacccatgatgatgagtgcttcctcttgtaatgta
aatttactagaaggggctacctctgaagtacttggtgatgcttcaactggttttatcgtc
aacgttgttagggaggaaggtgaggatgctgtcaggattcctccaagcatttctgccaaa
ttaaagacacatcaagttgctgggattcgttttatgtgggagaatatcatccagtgtatc
agaaatgtgaaggctggggataaaggccttggttgcattttagctcataccatgggcctt
ggtaaaactttccaggtcatagctttcttgtacactgcaatgaggagtgttgatttaggt
ctgaaaacagctctggttgtcgcaccagtgaatgtgttgcacaattggaagcatgagttc
aacaagtgggagcctaaggaattcaagcctcttcgtgtttacatgcttgaagacaaatca
agggagcaacaaagagcagaattgctaatgaaatggagaaggaagggcggtgtatttttg
attggatataactcatttagaaatttatcgcttgcaaagaacatgaaagatcttaaatca
gcggccgaaatttgctctgcacttcaggatgggcctgatatacttgtttgtgatgaggct
catattattaagaacaccaaggcagaaattactcaagttttaaaactagttaaatgccag
agaagaattgctttgacaggatctcctcttcagaacaatcttatggagtattactgtatg
gttgattttgtaagagaaggatttttaggaagtatgcatgagtttcgtaatcggtttcaa
aatcctattgagtttggccaacatgcaaactccactgctgaagatgtgcgaatcatgaat
cagaggtcacatattctatatgagcagctaaaagggttcgtccaaagaatggacatgagt
gtggcgaagaaagacttgcctcctaagaccgtgtttgtcatagctgtaaagccttcttca
ttacagaagaaattatacaaaaggtttcttgatgttcatgtattttcacacaaggcttct
tctgaaggaaccaggaaacattttttcgctgcatatcaaaccttagcccagatatgcaac
catccgtggattctgcggttgatgaaagacaaaggatatgcaaagcgagaagatactcca
gatgatatttctagtgatgaaaatatggattccaatttagggattggagaaaaaacgaag
gcaaaaattgacaaaggcttccttcatgagggttggtggaacagtcttttgaatcaatat
catcagtgggaaattgaatatagtggaaaaatggttttgttgctggacattcttacaatg
agtactaaattaggcgataaagctctagtttttagccagagcatagcaactctagatttg
atagaatcttatctatcaaaattgtcgcagccaagtaaggggaaactctggaaacgagga
aaagactggtatagaattgatggcaggacagatggttttgaaagacaaaagcttgttgat
gcatttaacaatcctcagaatggaagagtgaagtgcacccttatatcaacaagagctgga
gctatgggaattaatctttttgctgccaatcgtgtaattattattgacggctcttggaat
ccaacttatgatcttcaagccatataccgggcttggagatatggtcagaaaaagcctgta
tatgcttatcggttggtggcacatgggactatagaagaaaagatttataaacgtcaggtg
aaaaaggagggccttgctgcaagggtagtagatagacaacaagtcctcaggagtatgtct
aaagaagagatatcagatctctttaattttgatgatgatgagaaccttgatgtgttgtct
gaattgaatgcgaaaagtgggcatttagctgatctggacaactgcaaaaatgtcgtagat
tcatcaaaactaagttctgattgtcccaggagctgcgcttctgataaactaatggaaacg
ttacttgatcagcatcgcctaagatggataatgaatttccatgagcacgagacattactg
caggagaatgaagaagagaagcttacaaaagaagagcaagatttggcttgggaagtattc
aaaagaagtattgatcggcaagaagtacagaaagtgcctgctgactttgagtggcaggaa
gtgagtagggttccgcctgacgtaacattcgagcaaaaacaaagtagtttaaacgctaac
attttagaagagagaaccggtaccaccaatccgttggcgaatgtccccacaagatacaat
atgccagcaaggagatgcaccaatatatcccacttatacattctgaagtctcaaggaata
aaagtaggttcgagtactatttgtggggaatgcggccaagatataagttgggagtatctc
aaccgaggtagctag
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