KEGG   Amaranthus tricolor (tampala): 130817381
Entry
130817381         CDS       T09367                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03020  RNA polymerase
atri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130817381
  09124 Replication and repair
   03420 Nucleotide excision repair
    130817381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130817381
   03400 DNA repair and recombination proteins [BR:atri03400]
    130817381
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130817381
  RNA polymerase III system
   RNA polymerase III
     130817381
  RNA polymerase I system
   RNA polymerase I
     130817381
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130817381
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 130817381
NCBI-ProteinID: XP_057539032
LinkDB
Position
7:24943789..24948358
AA seq 147 aa
MSPPLLFEDIFNIINIDPDGKKFDKVSRIEAQSDKFDAYILLDVNIDVYRINKDKRYTIG
LATTLDLDGTPDTGYYNQTSRETLADRYEYVMHGRTYRVADVDSDGQEKGEIYVSFGGLL
MMLKVDKSVSKHFELDQRLFLLMKRTE
NT seq 444 nt   +upstreamnt  +downstreamnt
atgtctccaccactcctctttgaagatatcttcaatattattaatattgatcctgatggc
aagaagttcgacaaagtttctcggattgaagcacaaagtgacaaatttgatgcatacata
ctgcttgatgtgaacatcgatgtgtaccgtattaacaaagataagcgttacacaattgga
cttgcaaccacccttgatttggatggaactcctgacactgggtactataaccagacctca
cgggagacattggcagacagatacgagtatgtcatgcatggaagaacttatcgtgtagct
gatgttgattctgatggacaagagaagggggagatttatgtttcatttggcggtctgttg
atgatgctgaaagtcgacaagagtgtgagcaaacattttgaactggaccagagattgttc
ctcttaatgaagagaaccgagtag

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