KEGG   Amaranthus tricolor (tampala): 130817442
Entry
130817442         CDS       T09367                                 
Name
(RefSeq) RNA-binding protein Y14-like
  KO
K12876  RNA-binding protein 8A
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03013  Nucleocytoplasmic transport
atri03015  mRNA surveillance pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130817442
  09122 Translation
   03013 Nucleocytoplasmic transport
    130817442
   03015 mRNA surveillance pathway
    130817442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atri03019]
    130817442
   03041 Spliceosome [BR:atri03041]
    130817442
Messenger RNA biogenesis [BR:atri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130817442
Spliceosome [BR:atri03041]
 Complex C
  Other components
   EJC/TREX
    130817442
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 130817442
NCBI-ProteinID: XP_057539131
LinkDB
Position
7:25845502..25855366
AA seq 204 aa
MAAADVEAVDFEPEEDDLMDEDGVVAEADGGSPSALHPKLKSAITGAGSGSAAGFAAKKT
KGRGFREEDADRNSRLTSRDFDSLDSEGGPGPARSIEGWIILVTGVHEEAQEEDLHNVFG
EFGQLKNLHLNLDRRTGFVKGYALIEYEKFEEAEAAIKEMNGAKLLEQLINVDWAFCNGP
CNRRKGNRRRSPRGNRSRSPRRRF
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcggcagcagatgtagaagcggttgatttcgaaccagaagaagacgatcttatggat
gaagatggcgtagttgctgaagccgatggtggttctcctagtgctcttcatcccaaactc
aaatccgctattactggcgctggaagtggttcagctgccggctttgcggctaagaaaacc
aaaggtcgtggatttcgtgaagaagacgccgatcgaaattcccgtttgacgtctcgcgac
tttgattcccttgactctgagggcggacctggccctgctcgctcaatcgaaggttggatt
atactggtcacaggagttcatgaagaggctcaagaagaagatctccataatgtctttgga
gagttcggccagcttaaaaacctccatttgaacttggatcgtcgtactggatttgtcaag
ggttatgcactgattgagtatgagaagtttgaagaagcagaagctgcaataaaagagatg
aatggtgctaaattgcttgagcagttgataaatgttgactgggctttctgcaatgggcct
tgcaacaggagaaagggaaatcggagaagatccccacgtggcaaccgatcaaggagtcca
agacgaagattttaa

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