Amaranthus tricolor (tampala): 130817464
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Entry
130817464 CDS
T09367
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130817464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130817464
Spliceosome [BR:
atri03041
]
Common components
Common spliceosomal components
SR proteins
130817464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
130817464
NCBI-ProteinID:
XP_057539166
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All DBs
Position
7:complement(24230261..24242381)
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AA seq
273 aa
AA seq
DB search
MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVEIDLKIPPRPPGYAFVEFEDERDAED
AVYGRNGYDFDGHRLRVEFAHGGRGHPSSDRHSSYSSSSRGGAPKHTDYRVMVTGLPSSA
SWQDLKDHMRRAGEVCFSDVYKDRRYGGMVGVVDYANYDDMKRAVRKLDDSEFRNAFSRA
YIRVKEYSRSLSPDDRSRRRSYSRGRSYSRSRSYSISPRRNSRRSYSRSPSRSRSRSLSR
SPARRSLSRSASQSRSPAARSDRSLSVYSDERS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacgcatttatcgtacaatttatgttggtaaccttcctggtgatattcgcgag
agagaagtggaggatatcttttacaagtatggcccaattgttgaaatcgatttgaagatt
cccccaaggcctccaggttatgcatttgttgagtttgaagatgaacgagatgctgaagat
gctgtgtatggtcgcaatgggtatgactttgatgggcatcgtttgcgggtggaatttgct
catggtggccgaggacatccatcatcagaccgccatagcagttacagtagcagtagtcga
ggtggtgcacccaagcatactgattatagagttatggtcactggacttccctcatctgct
tcttggcaagacctgaaggatcacatgcgaagagctggtgaggtttgtttctcagatgtg
tacaaggatcgacgatatggtggtatggttggagttgttgattatgcaaattatgatgac
atgaaacgtgctgtcaggaagttggatgattctgaattccgtaatgcattttctcgtgct
tatattcgtgtgaaggaatactcaaggagtctaagcccagacgataggtccagacgcaga
agctatagtcgtggtcgtagttatagtcgaagtcgcagttacagcatatctcccagaaga
aattcacgccgttcttattctagatctccttcgagatcccgatctcgatctctctctaga
tctccagctcgtcgcagcttgagcaggagcgccagtcaatctcgttcaccagctgcaaga
tctgacaggagcctttctgtttactctgatgagcgtagttga
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