Amaranthus tricolor (tampala): 130817548
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Entry
130817548 CDS
T09367
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130817548
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130817548
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atri04040
]
130817548
Protein phosphatases and associated proteins [BR:
atri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130817548
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
130817548
Ion channels [BR:
atri04040
]
Chloride channels
Chloride channel (CLC)
130817548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
130817548
NCBI-ProteinID:
XP_057539295
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All DBs
Position
7:7247918..7255394
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AA seq
782 aa
AA seq
DB search
MDPQDNDFTHTDDETTDVENLGDLDHEDDKRWTSMSERNTSIRIPLLRKRTNTTSQIAVI
GANSCPIESLDYEMIENELFKQDWRSRKTVQIFQYVFLKWGLALLIGLGTGLVGFFNNIA
VENIAGFKLLLTNNLMLEGSYFKAFLAFAGCNIVLATAASALCAFIAPAAAGSGIPEVKA
YLNGVDAPSILAPRTLFVKIFGSVLGVSAGFVVGKEGPMVHTGACIANLIGQGGSRKYGL
TWTWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTT
AVVAIVLRGFFQYCVSGKCGLFGEGGLIMYDVNEHVAGYGVYDILAVIFLGVVGGVLGSF
YNFLVDKVLRTYSYINEKGPYYRVLLAVAISILTTCCAFGLPWFTKCTPCPKDSTIKCPT
LGESGNYKSFQCPAGEYNDLASLLLNTNDDAIRNLFSTTVIREFQISSLFIFFITIYFLG
IVTYGIAVPAGLFIPVILGGSVYGRLVGRLFHSLSVLDTGLFSLLGAASFLGGTMRMTVS
LCVILLELTNNLLLLPLVMIVLLISKTVADCFNHGVYDQIVKLKGLPYLEAHAEPYMKHL
VAGDAVSGPLITFSGVEKVETIVHALRTTGHNGFPVIDEPPFSDSPELCGVVLRSHLLVV
LKAKCFSEDRELTGRDILKKFSPFDFAKPGSGKGLTLDDISVTKEEMEMYVDLHPITNAS
PYTVLETMSLAKAKILFRQLGLRHMCVVPKSQGRPPIVGILTRHDFMPEHIFGLYPHVKS
HK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggatccacaagataatgatttcacccacactgatgatgagactactgatgtcgaaaac
cttggagacttagatcatgaggatgataaacgttggacatccatgtcggagaggaacacg
tctattaggataccacttttgagaaagagaaccaatactacttcacagattgctgttatt
ggggccaattcctgccccattgagagccttgactatgagatgatagaaaatgaattattc
aagcaagattggaggtcaagaaaaactgttcaaatatttcaatacgtgtttctaaaatgg
ggattggctctcctcattggtctcggtactggacttgttggtttcttcaataatattgca
gttgagaatatcgctggtttcaaattgctgctcactaacaatctcatgttggagggaagt
tactttaaggcttttcttgcatttgctggttgcaacatagtgctggctactgctgcttca
gcactttgtgcatttattgctcctgctgctgctggatcgggtatccctgaggtcaaagct
tatctcaatggcgttgatgctccgtcaatattggctccaagaactctctttgtcaagatt
tttggctctgttcttggtgtttccgcgggttttgtggttggtaaggagggacctatggtg
cataccggtgcttgcattgccaacttgattggtcagggaggctctcgcaagtatgggttg
acctggacttggctcagatatttcaagaatgatagagatcgacgagacttgatcacctgt
ggtgctgctgcaggagtggctgctgcttttcgtgctccagttggtggggtccttttcgcc
cttgaagaagcagcttcctggtggcggagtgctctactatggagaacatttttcaccaca
gctgtggttgctatagttttgagaggcttctttcaatattgcgtgtccgggaaatgtggt
ttgtttggtgagggtgggttaataatgtatgatgtcaatgaacacgtcgctggttatggt
gtttatgatatactggcagtgatatttcttggagttgttggaggtgttcttggaagtttt
tacaactttcttgttgacaaggtcctacgcacttacagctacatcaatgaaaagggtccg
tactacagagttcttcttgctgttgccatatctatcttgacaacctgctgtgcttttggc
cttccttggtttacaaagtgcactccctgtcctaaggattcaactatcaagtgccctact
cttggtgagtccggaaattacaagagctttcaatgtccagctggcgagtataacgatctt
gcatccctccttctcaacacaaacgatgatgctatccgcaatttgttcagcactaccgtc
ataagagaatttcagatctcttcactcttcatattcttcatcacaatttatttccttggg
atcgtcacttatgggattgcagtacctgcaggactattcattcctgtaatcttaggcgga
agtgtttatggtcgtcttgtgggtagactctttcattctttgtcagtgctggacaccggt
ttattctctcttctaggagctgcctcattcctcgggggaaccatgagaatgacggtctct
ctgtgcgtcattctgcttgaacttacaaacaatttgttattgctcccccttgtgatgata
gtactcctcatatccaaaactgtggcagattgcttcaatcacggcgtctatgatcaaata
gtgaaactcaaagggttgccatatttggaagctcacgctgagccttatatgaagcacttg
gttgcaggagatgccgtttctggtccattgatcacattttcaggtgttgagaaggtggag
actattgtacatgctttgcgaactaccgggcataatggatttcctgtaatcgatgaacca
cctttctcagattcacccgagttatgtggagtagttctaaggtcacatttgcttgtagtg
cttaaagcaaagtgtttctctgaggatagggagcttacaggtagagatatcttgaagaag
ttttctccctttgactttgcaaagcctgggtcgggaaaaggactcacattggatgatata
tctgtgaccaaggaagagatggaaatgtatgttgatcttcacccgatcactaatgcatcc
ccatatactgtgcttgagacgatgtcactagccaaagctaaaattctcttcaggcaactt
ggactcagacatatgtgcgtcgtaccaaagagtcaagggagaccaccaattgtgggtatt
ttgacgcgtcatgacttcatgcctgagcacatattcggactctatccccatgtgaaatca
cacaagtaa
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