Amaranthus tricolor (tampala): 130817590
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Entry
130817590 CDS
T09367
Name
(RefSeq) (-)-germacrene D synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
130817590
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
130817590
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
130817590
NCBI-ProteinID:
XP_057539368
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Position
7:complement(30443538..30450684)
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AA seq
559 aa
AA seq
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MEEQNNFCSSNHNETQNNGRPLAHFHPDLWGDHFLNYTPPDEAIQTQREQEVRELKEEVR
RKLLGIAKDYKERLILIDVVEQLGIAYHFEDEIEANLQHIYNYSKPNDQHEDDLHFVSLR
FRLLRQHGFFASSDVFNKFKNEDGKFEESLTKDVLGILNLYEAANLRIHGEKILDEAVEF
TTTRLKSLVGQLKNPLKAKVSRALKLPLQKGVIRLLSRYYISTYEDESAHDETILKFAKL
DFNLLQTLHLKELRDLSRWWKDLDFGRKLPFARNRITEVYFWILGTFYEPKYTLGREIFT
KLFKMTSIMDDTYDAYGLFPELVAYTEAVHRWDEKCTDQLPDYMKLTYEALLHTFADFER
KLAKEGRSELVSYVRELMKAQCQGYFQEAKWCHEKYIPTYDEYLNDAAIITAGYTLMSGT
AFLGMAEFATKSVFEWVSQTPKPIKASCIIGRLIGDMASFKIERKRDHVASVVECYKKQY
GVNEEEAIKELQIIVEKAWMDLNEEMLRPTTFPMPLMTRILNLSRVIEVFYRLGEDDYSF
VSKSMQDKIRLVLIDPIHV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaaaataatttttgtagttcaaaccataatgaaacccaaaataatggtcgt
ccattagcacattttcacccagatctttggggtgatcactttcttaattacactccacca
gatgaggcaatacaaacacaaagggagcaagaagtgagggagctaaaagaggaagtaaga
agaaagcttttgggcattgctaaagactataaagaaaggctaattttgatagatgttgtt
gagcaacttggcattgcttaccactttgaagatgaaattgaagccaatttacaacatatt
tacaactattccaagcctaatgatcaacatgaggatgatctccactttgtttctcttaga
tttcgtcttttaagacaacatggctttttcgcctcatctgatgtattcaacaagtttaaa
aacgaagatggaaaatttgaagaatccttgacaaaagatgtattaggcatactaaatttg
tatgaagcagcaaatcttagaattcatggagagaaaattcttgatgaagctgtggaattt
acaacaacaagattgaaatcattggttggacaacttaagaaccctttgaaagcgaaagta
agtcgagctttgaaactacctcttcaaaaaggtgtcattagattattatcgcgatattat
atttccacgtatgaagatgaatctgcgcatgatgagacgattttaaagttcgcaaaactt
gatttcaacttgttgcaaactttacacttgaaagagcttcgagatctttccaggtggtgg
aaagatctggactttggcagaaaattaccatttgcaagaaacagaattactgaggtatat
ttttggatattaggaaccttttatgaacccaaatatacattaggaagagaaatatttaca
aaattatttaagatgacatctattatggatgatacatatgatgcatatggtctctttcca
gagcttgtagcttacactgaagctgttcacaggtgggatgagaaatgtacggaccaattg
cctgattatatgaagctcacttatgaggctcttcttcatacatttgctgattttgaacga
aaattagccaaagaaggaagatcagaacttgtttcttatgttcgagaattgatgaaagca
caatgtcaaggctattttcaagaggcaaaatggtgccatgaaaaatatatcccaacatat
gatgaatatctgaatgatgctgccattataactgctggttataccttaatgtctgggaca
gctttcttaggcatggctgaatttgctaccaaatcagtttttgaatgggtttctcaaacc
ccaaaacccatcaaagcttcttgcataattggaaggctcattggtgacatggcaagcttt
aagattgaacgaaaaagagatcatgttgcatcagttgtagaatgctacaagaaacaatat
ggggtgaatgaagaagaagctataaaagaacttcaaattatagttgagaaagcatggatg
gatttgaatgaagaaatgcttcgaccaacaacatttccaatgccattaatgactcgtata
cttaacctttcaagagtcattgaagttttttatcgtcttggagaagatgattactcattt
gttagcaaaagtatgcaagataagattcgattggtgcttattgatcctatacatgtttaa
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