Amaranthus tricolor (tampala): 130817644
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Entry
130817644 CDS
T09367
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130817644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130817644
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130817644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
RNA_helicase
AAA_16
AAA_22
AAA_2
AAA_14
Rad17
TIP49
IstB_IS21
AAA_33
AAA_17
Mg_chelatase
nSTAND3
AAA_28
ATPase_2
NPHP3_N
ABC_tran
Parvo_NS1
AAA_25
AAA_18
Viral_helicase1
NB-ARC
Sigma54_activ_2
TsaE
NACHT
AAA_19
Cytidylate_kin2
Bac_DnaA
Nucleolin_bd
ATPase
Motif
Other DBs
NCBI-GeneID:
130817644
NCBI-ProteinID:
XP_057539455
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All DBs
Position
7:24505596..24515952
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AA seq
746 aa
AA seq
DB search
MVKRFGRKRSYKTPVLSSAVIEERIDKCKLTHLCPDEIADHLYSAFPDYNHYKLIPFRSK
IRKILQQQLRKRKRDCAINDEKYSVLRSSVSTNSFSMSSHDDSDSEDMLKFMLREGYKDN
LKFTENSRDCANSKDSGELCSKIIEEERGDDEKDLQRGVGPSFRDFGGIKKLLEDLEWDV
IQPLRHPKLMRLMDVKPISGILLYGPPGCGKTRLAQAIAHETSLPFYQISAPELVSGVSG
ASEEKIRELFSKAYKTSPSIVFIDEFDAIASKRDNMQKVADCRIVNQLLTCMDESHKPVK
RNGEIANCEPDERLGYVLVIGATNRPDAIDPALKRCGRFDKEILLPIPDEKARAEILSLL
TLNKRVDGDLDMAKIARATPGFVGADLVHLVNKAGILAMKRFIIHQRLDPGVQLAEDQLD
ESPEELEKLKILMVDFEEAAKLVQPSLRREGFSAIPKVTWEDVGGLKELRREFERHIVGR
IKYRQLDEIAGVESATDFLLFGPPGCGKTLIAKAVAHESGASFIHIKGPELLNKYVGESE
SHIRMLFHRARTCSPCILFFDEVDALTAQRGKEGSGVVDRLVTQLLIELDGGEDRRGVYV
IGATNRPEVVDRALRRNGRFGNLLYVPLPKPDERGLILNALARKKPVDASLNLFDLGRSS
ICENFSGADLVELMNEAAMALRDEMLTAFKDEPTSGKGVLASPDFTIKQAHFELARRRVF
PSVSEEQRQYYDMLSKKFRATSNFPR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaagatttggccggaagcgttcatataaaacaccagtgttgtcatcggcggta
attgaagagcgtatagataagtgtaaattaactcatctttgtcctgacgaaatcgccgac
catctgtactccgcttttcccgactacaaccactacaagctcattccttttcgctcaaaa
attaggaaaattcttcaacaacaattgcggaaaagaaagagggattgtgctataaatgat
gaaaagtattctgtgttgcggtcctctgtttccactaattcgttttcgatgtcatctcat
gatgacagtgacagtgaggatatgttgaaattcatgcttagggaaggatataaagataat
ttgaaatttactgaaaattcgagggactgtgctaattcgaaggattcgggtgaactatgt
agcaaaataatcgaagaagaaagaggtgatgacgagaaagacctacaaagaggtgttggg
ccaagttttagagatttcggagggattaagaagctgctggaagatttagaatgggatgta
attcagcctttacgacacccaaagttaatgcggcttatggatgtaaagccgatttctggg
attttgctttatggtcctcctggttgtggtaagacacggttagctcaagccattgctcac
gagacaagtcttcctttctatcagatatccgcccctgaactcgtctctggtgtctccggt
gcatcggaggagaagattcgtgaattattctcaaaagcatataaaacttctccttcaatt
gtatttattgatgagttcgatgcaattgcttcaaagagagacaatatgcaaaaagtggca
gactgtcgtattgttaatcaattattgacatgcatggatgagtctcataagcctgtgaag
cggaatggtgagattgcaaattgtgaacctgatgaacgattaggttatgttcttgttatt
ggagctaccaacaggcctgatgctatagaccctgcattgaagaggtgtgggagatttgac
aaagagatcctattaccaattcctgatgaaaaggcaagggctgagatactctccttattg
acattaaacaaaagagttgatggtgaccttgatatggcaaaaatagccagggcaactcca
ggctttgttggtgctgatttagtacacctggttaacaaagctggaattcttgccatgaaa
aggttcatcattcatcagaggttggatccaggcgttcaactagcggaggatcaactggat
gaatctcctgaagagttggaaaagctcaagattttgatggttgatttcgaggaggcagct
aaattggtgcaaccctcattacgaagggaaggcttctctgccattccaaaggtgacatgg
gaagatgttggaggactgaaagaattaagaagagagtttgaacgccatattgttgggcgc
ataaaataccgtcagcttgatgagatagctggagtggaatctgcgacagatttcttgctt
tttgggccccctggttgtggaaagactctgattgccaaggctgtagctcatgagtctgga
gcaagttttatccatatcaagggccctgaacttttaaacaagtatgttggtgaaagtgaa
tcacatataaggatgttatttcatcgcgctaggacctgttctccatgcatacttttcttt
gatgaggtggatgctttgactgcacagcgtgggaaagaagggagcggcgttgtagatcga
cttgtaacccagcttttgatcgagttagatggcggagaagatcgtcgtggtgtttatgta
attggggctacaaatcgacctgaggtggtggatcgggcactccggaggaacgggagattc
ggaaatctcttgtacgtgccactacctaaacctgatgaacgtggtttgattttaaacgct
ctggctaggaagaaaccggtagatgcgagcttgaacctgtttgatctgggcagaagttca
atttgtgaaaattttagtggtgctgaccttgttgaactgatgaatgaagctgcaatggct
ttgcgggatgagatgctaactgctttcaaagatgagccgacatcagggaagggtgtttta
gcatctcctgatttcactattaagcaagctcattttgaacttgcacgacgtagagttttc
ccttctgtgtctgaagagcaaagacagtactatgatatgttgtcaaagaagtttagagca
acttcaaattttccaaggtaa
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