Amaranthus tricolor (tampala): 130817701
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Entry
130817701 CDS
T09367
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130817701
Spliceosome [BR:
atri03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130817701
Other components
Complex C specific factors
130817701
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
HTH_20
DUF6304
Motif
Other DBs
NCBI-GeneID:
130817701
NCBI-ProteinID:
XP_057539534
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Position
7:5769100..5773305
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AA seq
870 aa
AA seq
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MDDYQEVERFGMDNDFEGGQFIGDEFFYKKRKEKSVQTRDDVLYGVFASGSSDSDYDDDS
FSGKKKRRKGGIVKKHDYSKPVNFVSTGVVAPNQEIDRNAKEGIEKPSDEDPDDGFKPGL
GLGAGPNSGAGLGFGLGSSNRAEKSLSSKRQDDGEAAEEEDLYLPTAFGKMIKEGAEKRR
EMAKLSGGSKSKSGGGVGRKIKDGKGGDVGSFEKHTKGIGMKLMESMGYKGGGLGKNAQG
IVAPIEAKLRPKNMGMGFNDYQESKNLPSLVDVPPPPELEEKQQESKQREEKLWKKQARA
RAKKKENIITPDELLALKAEAQGPDLVLQKVVDMRGPQVRVLTNLENLNAEEMARENDIP
MPELQHNIRLIVDLVELDIQKIDRDLRTERETAVALQKEKEMLQIEAARQMKQIDSMEEV
VQALETIEEEHMSGRLTLESLAKSFGDLQKKFPEEYKLGNLSCIACSFALPLLIRVFQGW
DPLMNPSHGMDVMSRWKGLLQGDEDHDIFEDASAPYSQLVAEVVFPAVRIAGINTWQARD
PEPMLRFLELWEKLLPPSVLQSLLDMIVMPKLSEAVNSWEPCRETIPIHVWVHPWLPLLG
QKLETLYQGIRLKLGTVLYKWHPSDKSAFTILSPWKTVFDAASWEQLIVRSILPKLIDVM
QEFQVNPANQILEPFHWVMTWASSVPIHHMVSLLEIHFFSKWQQVLYHWLSTSPNFEEVM
RWYLGWKEFIPPELLANERVRNQLNLGLDMMNRAAEGLEVVQPGVKENISYLRIQEQRQY
EAQLKAAQQTNSVPKNVKEVVEAYAQQHGLHFKPKPGRFHKHHQVYSFGSVSIIVDSFNE
QIFAQVQEEWPLVTLDKLLEMQNISGPRRR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaagaagtggagagatttgggatggataatgattttgagggtgggcag
tttatcggggatgagtttttttacaagaaacgtaaagaaaaatcagttcaaactagggat
gatgtattgtatggtgtatttgcatccggtagctcagattcagattatgatgatgactcc
ttttctgggaagaagaagaggagaaaaggggggattgttaagaagcatgattattcgaaa
cctgtaaattttgtttctactggtgttgttgctcctaatcaagagattgatcgaaatgcg
aaagagggtattgaaaagcctagtgatgaggatccggatgatgggtttaaacctgggctt
gggcttggagctgggccgaattctggtgctgggttagggtttggattgggttcaagtaat
agggctgagaaaagtttgagtagtaagaggcaagacgatggggaagcagcggaagaggag
gatttgtatttgccaactgcttttgggaagatgattaaggaaggggcagagaagcgacgt
gagatggcaaaattgtctgggggcagcaagtcaaaatcaggagggggagtaggaaggaaa
attaaagacggaaaagggggagatgtcgggagttttgagaagcatacaaaaggaattggg
atgaaattgatggagagtatggggtataaaggtggtggtttggggaagaatgcgcaaggt
attgttgctcctattgaggcaaagttgaggccgaagaatatggggatggggtttaacgat
taccaggaaagcaaaaacttgccgagcttggtggatgtgcctccacctcctgaattggag
gaaaaacagcaagagtctaagcagagggaagaaaaactatggaaaaaacaggctcgagct
cgtgctaagaagaaagagaacattattacgccagatgagttgttggctttgaaggcagag
gcacaagggccagatttggtacttcagaaggttgtggacatgaggggaccccaggttcgg
gtgttaacgaatctggaaaatctgaatgcggaggaaatggcgagggaaaacgatattccc
atgccggagttgcagcacaacattagattaatagtcgacttggtagagcttgacattcag
aagatcgacagggatttgagaactgagagagagactgccgttgcattgcaaaaggaaaag
gaaatgcttcagatagaagctgctcgtcagatgaagcagattgattcaatggaggaagta
gttcaggctctggaaactattgaggaggagcatatgtcagggaggttgactttagaatcc
cttgcaaaatccttcggggatctgcaaaagaagttccctgaggaatataaacttggtaac
ttgtcttgtattgcatgctcctttgctcttcctctgttgattagagtgttccaaggatgg
gatccacttatgaacccatcccacggcatggatgtgatgagtcgttggaaaggtttattg
caaggagatgaagatcatgacatatttgaagatgcgtctgccccttattcgcagctggtg
gccgaagtagtgttccctgccgttagaatagcaggtataaacacatggcaggctagagat
ccagagcctatgcttcgatttctcgaattatgggagaagttgcttccaccttctgtgtta
cagtccttgcttgatatgattgtgatgcctaagttgtctgaagctgtgaattcttgggaa
ccatgtagggaaacaataccgatccatgtctgggtgcatccatggcttccattgcttggt
caaaagttggagacactctatcaagggatccgtttaaaattaggaactgtcctatataaa
tggcatcctagcgataagtctgcctttactatcttatcaccctggaagacagtatttgat
gcagcaagttgggaacaacttattgtacgatccattcttcccaagttgatagatgtgatg
caggaatttcaggtgaatcctgctaatcagatacttgaaccttttcattgggtaatgaca
tgggcttcttcagttcccatacatcacatggtcagcttacttgagatacacttctttagc
aaatggcagcaagtcctgtaccattggttgtcaacaagtccaaactttgaagaggtcatg
cggtggtaccttggatggaaagagtttatccctcctgaacttttggctaatgaacgtgtt
aggaaccaactaaacctaggcttggacatgatgaaccgtgcagctgaaggtttggaagtg
gttcaacctggagtgaaggagaacattagctatttgaggattcaagaacaaagacaatat
gaggctcagttgaaggctgctcagcaaacaaatagtgtgcctaagaacgtgaaagaagta
gtcgaggcttacgcacagcagcatggcttgcactttaagcctaaacctggaagatttcat
aaacaccatcaagtatatagttttggtagtgttagcattattgtggattccttcaatgaa
cagatctttgctcaagtccaggaagaatggccgttagtaactcttgataaacttctagaa
atgcagaatatttctggtccaagacgccgctga
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