Amaranthus tricolor (tampala): 130817806
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Entry
130817806 CDS
T09367
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130817806
Spliceosome [BR:
atri03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130817806
Other components
Complex C specific factors
130817806
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130817806
NCBI-ProteinID:
XP_057539696
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Position
7:complement(6111719..6115430)
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AA seq
869 aa
AA seq
DB search
MDDYQEVERFGMDNDFEGGQFIGDEFFYKKRKEKSVQTRDDVLYGVFASGSSDSDYDDDS
FSGKKKRRKGGIVKKHDYSKPVNFVSTGIVAPNQEIDRNAKEGIEKPSDEDPDDGFKPGL
GLGAGPNSGAGLGFGLGSRNRAEKSSSSKRLDDGVAEEEDLFLPTAFGKMIKEGAEKRRE
MAKLSGGRKSKSGGGVGRKIKDGKGGDVGSFEKHTKGIGMKLMESMGYKGGGLGKNAQGI
VAPIEAKLRPKNMGMGFNDYQESKNLPSLVDVPPPPELEEKQQLSKQREEKLWKKQARAR
AKKKENIITPDELLALKAEAQGPDLVLQKVVDMRGPQVRVLTNLENLNAEEMARENDIPM
PELQHNIRLIIDLVELDIQKIDRDLRTERETAVALQKEKETLQIEVARQTKQIDSMEEVV
QVLESIEEEHMSGRLTLESLAKSFWDLQNKFPEEYKLGNLSCMACSFALPLLIRVFQGWD
PLMNPSHGMDVMSRWKGLLQGDEDNDLFEDASAPYSQLVAEVVFPAVRIAGINTWQARDP
EPMLRFLELWEKLLPPSVLQSLLDMIVMPKLSEAVNSWEPCRETIPIHVWVHPWLPLLGQ
KLETLYQGIRLKLGTVLYKWHPSDKSAFTILSPWKTVFDAASWEQLIVRSILPKLIDVMQ
EFQVNPANQILEPFHWVMTWASSVPIHHMVNLLEIHFFSKWQQVLYHWLSTSPNFEEVMQ
WYLGWKELIPPELLANERVRNQLNLGLDMMNRAAEGLEVVQPGVKENISYLRIQEQRQYE
AQLKAAQQTNSVPKNVKEVVEAYAQQHGLHFKPKPGRFHKHHQVYSFGSVNIIVDSFNEQ
IFAQVQEEWPLVTLDKLVEMQNISGSRRR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaagaagtggagagatttgggatggataatgattttgagggtgggcag
tttataggggatgaatttttttataagaaacgtaaagaaaaatcagttcaaactagggat
gatgtattgtatggtgtatttgcatctggtagctcagattcagattatgatgatgactcc
ttttctgggaagaagaagaggagaaaaggggggattgttaagaagcatgattattcgaaa
cctgtaaattttgtttctactggtattgttgctcctaatcaagagattgatcgaaatgcg
aaagagggtattgaaaagcctagtgatgaggatccggatgatgggtttaaacccgggctt
gggcttggagctgggccgaattctggtgctgggttagggtttgggttaggttcaagaaat
agggctgagaaaagttcgagtagcaagaggctagacgatggggtagcggaggaggaggat
ttgtttttgccaactgcttttgggaagatgattaaggaaggggcagagaagcgacgtgag
atggcaaaattgtctggggggcgtaagtcaaaatcaggagggggagttggaaggaaaatt
aaagacggaaaagggggagatgtcgggagttttgagaagcatacaaaaggaattgggatg
aaattgatggagagtatggggtataaaggtggtggtttagggaagaatgcgcaaggtatt
gttgctcctattgaggcaaagttgaggccgaagaatatggggatggggtttaatgattac
caggaaagcaaaaacttgccgagcttggtggatgtgcctccacctcccgaattggaggaa
aaacagcaattgtctaagcagagggaagaaaaactatggaaaaaacaggctcgagctcgt
gctaagaagaaagagaacattattacgccagatgagttgttggctttgaaagcagaggca
caagggccagatttggtacttcagaaggttgtggacatgaggggaccccaggttcgggtg
ttaacaaatctggaaaatctgaatgcagaggaaatggcgagggaaaacgatattcccatg
ccagagttgcagcacaacattagattaataatcgacttggtagagcttgacattcagaag
atcgacagggatttgagaactgagagagagactgccgttgcattgcaaaaggaaaaggaa
acgcttcagatagaagttgctcgtcagacgaagcagattgattcaatggaggaagtagtt
caggttctagaaagcattgaggaggagcatatgtcagggaggttgactttagaatccctt
gcaaaatccttttgggacctgcaaaataagttccctgaggaatataaacttggtaacttg
tcttgtatggcatgctcctttgctcttcctctgttgattagagtgttccaaggatgggat
ccacttatgaacccatcccacggcatggatgtgatgagtcgttggaaaggtttattgcag
ggagatgaagataatgacctatttgaagatgcgtctgccccttattcgcagctggtggcc
gaagtagtgttccctgctgttcgaatagcaggtataaacacatggcaggctagagatcca
gagcctatgcttcgatttctcgaattatgggagaagctccttccaccttctgtgttacag
tcactgcttgatatgattgtgatgcctaagttgtctgaagctgtgaattcttgggaacca
tgtagggaaacaataccaatccatgtctgggtgcatccatggcttccattgcttggtcaa
aagctggagacactctatcaagggatccgtttaaaattaggaactgtcctatataaatgg
catcctagcgataagtctgcctttactatcttatccccctggaagacagtatttgatgct
gcaagttgggaacaacttattgtacgatccattcttcccaagttgatagatgtgatgcag
gaatttcaggtgaatcctgctaatcagatactcgaaccttttcattgggtaatgacctgg
gcttcttcagttcccatacatcacatggtcaacttacttgagatacacttctttagcaaa
tggcagcaagtcctgtaccattggttgtcaacaagtccaaactttgaagaggtcatgcag
tggtaccttggatggaaagagcttatccctcctgaacttttggctaatgaacgtgtcagg
aaccaactaaacctaggcttggacatgatgaaccgagctgctgaaggtttggaagtggtt
caacctggagtgaaggagaacattagctatttgaggattcaagaacaaagacaatatgag
gctcagttgaaggctgctcagcaaacaaatagtgtgcctaagaacgtgaaagaagtagtc
gaggcttacgcacagcagcatggcttgcactttaagcctaaacctggaagatttcataaa
catcatcaagtatatagttttggtagtgttaacattattgtggattccttcaatgaacag
atctttgctcaagtccaggaagaatggccattagtaactcttgataaacttgtagaaatg
cagaatatttctggttcaagacgccgctga
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