Amaranthus tricolor (tampala): 130817920
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Entry
130817920 CDS
T09367
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Module
atri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130817920
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130817920
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ThermoDBP-RP_arch
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
130817920
NCBI-ProteinID:
XP_057539873
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Position
7:complement(18926599..18930648)
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AA seq
402 aa
AA seq
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MSKLNYKQKLALYLFSMVLLNLPSSSVDATKVLNVQNFGASDMGKTDTSKAFLSAWKAAC
NTKGSATIFIPKGRYLLHPVNFEGVDCKSNNIRFEMDGTIVAPFDYHLLGGVERWIGFER
VSGVTIAGHGTFDAKGASLWACKKGQNGANCPDGATTLTFTNSNNIVIKGITSLNSQLYH
IVINNCKNVLFQAVKIRATGNSPNTDGIHVQFSSDVTIMNSNIKTGDDCVSIGPGTKNLW
MERIACGPSHGISIGSLAKDKDEEGVQNVTVKTAVISYSTTGVRIKSWGRPSNGFVQGVV
FQDILMHNVWNPIIIDQNYCPHNINCPNQESGIEIEDVRYQNIRGTSQSEVAMTFDCSST
NPCKGIQLQNIDLKYIDGKAQSYCKNAHGNVFGLIQPTNCLK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctcaattataaacaaaaattagccctatatttgttttctatggtgctttta
aacctaccatcatcatcggttgatgcaacaaaggtcttgaacgtacaaaattttggagcg
agcgacatgggcaaaaccgacacgagcaaggccttcctaagtgcatggaaggctgcatgc
aacaccaagggatcggcgacgatttttataccaaaggggaggtatttgcttcatccggta
aactttgaaggtgttgattgtaagagcaataatattaggtttgagatggatggaacaata
gtagcaccctttgattatcatttgttaggtggggtggaacgatggattgggtttgaaagg
gttagtggtgttactatcgctggtcatggaacttttgatgccaagggagcttccttatgg
gcttgcaagaagggtcaaaatggtgcaaattgtcctgatggagcaacgacattaacattt
accaactccaacaatatagtgatcaaaggcattacttcacttaacagccagttgtaccat
attgtgattaataactgtaagaatgttctttttcaagctgtcaagattagagccaccgga
aacagtcctaacactgatggtattcatgtccaattttcgtcggacgtcactattatgaac
tctaacattaaaaccggagatgattgtgtatccattggacccgggactaagaacttgtgg
atggaacggattgcttgtggaccaagtcatggtatcagcattggtagcctagcaaaggac
aaggatgaagaaggggtccaaaatgtgacagtgaaaacagcagtaatcagttactcaaca
actggtgttagaatcaaatcatggggaaggcctagcaatggctttgttcaaggtgttgtc
tttcaagatattcttatgcacaatgtttggaatcctattattattgatcaaaattattgt
cctcacaatattaattgtccaaatcaggaatcaggtatagaaatcgaggatgtgaggtac
caaaatataagaggaacttcacaaagcgaggtagcgatgacatttgattgcagttccaca
aatccatgcaaaggaattcaactccaaaatattgatctcaaatacattgatggaaaagcc
caatcatattgtaaaaatgctcatgggaatgtttttggcttgattcaacccaccaattgc
ttgaaatga
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