Amaranthus tricolor (tampala): 130818041
Help
Entry
130818041 CDS
T09367
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
130818041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atri04040
]
130818041
Ion channels [BR:
atri04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130818041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
130818041
NCBI-ProteinID:
XP_057540050
LinkDB
All DBs
Position
7:complement(10547504..10551968)
Genome browser
AA seq
743 aa
AA seq
DB search
MESKKHKQVSFYENGNQPFSSWGRNESFASEKSSNSVSPAYKQTTPLLSNQIGIGFGSIN
RIHRLGEAFKLPSLRVFSRNDGKWWKRTLDPSSEVVLLWNRIFLVACLVALFVDPLFFYL
PQVDTIHNSFCMSRNVPLGAVVTFFRTLADAFYFLHVLVRFRTAFVAPSSRVFGRGELVM
DRKEIARRYIRSGFFIDLIAALPLPQIVIWFIIPAIKLSKSRSTYNALQLIVFIQYIPRL
YLIFPLSSEIIKAAGVVTKTAWAGAAYNLLLYMLASHILGAAWYLLSVERYSSCWKSACR
HEKSPIECRLKYLDCSTKDDPERIIWANSTRVFSICDPNANSTFDYGIFQNAMLKDVVSD
NFMDKYFYCLWWGLQQLSSYGQNLETSTFVWESAFCILISIVGLVLFSLLIGNMQTYLQS
ITSRLEEWRLRRRDTEEWMKHRQLPQHLRERVRRFVQYKWLATRGVNEEAILSSLPIDLR
REIQRHLCLDLVRRVPFFAQMDDQLLDAICERLRSSLNTAGTFIVREGDPVTEMLFIIRG
KLDSSTTNGGRSGFFNSITLRPGDFCGEELLAWALLSSSANFPSSTRTVKAIEEVEAFSL
QAEDLRFVANQFRRLHSKKLQHTFRYYSHHWRTWGACFIQAAWRRFKKRKMAQSLSSRES
FSNLFIESSLFTQHENVEYQNLEHVPDDNDEEAAASSQAIQQLGVTILAKRFAGNARKGA
QRTRDIELPKMMKPQDPDFFAEP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaaaaaacataagcaagtcagtttttatgagaatggaaaccaaccattttca
tcatggggaagaaatgagtctttcgcatctgaaaaatcatcaaattcagtctctcctgca
tataaacaaacaacccctttactaagcaatcaaatcggtattgggtttggaagcataaat
agaattcatagactaggagaagctttcaagctaccaagcttaagagtattctcaagaaat
gatggaaaatggtggaaaaggacacttgatccatcaagtgaggtggtgttgttgtggaat
cgtatattcttagtggcttgtttggttgcactttttgttgatcctttgtttttttatctt
ccacaagtagataccattcataattccttctgtatgtcaaggaatgtgccattgggtgct
gttgttaccttttttcgtacactggccgatgctttctatttcttacatgtacttgttagg
ttccgaactgcttttgtagctcctagttctcgtgtctttggaagaggtgaacttgtcatg
gataggaaggagattgctaggaggtatattagatccggtttcttcatcgatctcattgct
gcattgcctcttccgcagattgttatatggttcatcattccagcaattaagctctctaaa
tcaagaagcacttataatgcacttcaattgattgttttcatccaatatattccgcgattg
tatctgattttccccctgagttccgagattattaaagctgctggtgttgtcactaaaaca
gcttgggcaggagctgcttataatcttctcttgtacatgttagctagtcatatcttaggg
gcagcttggtatctactgtctgtagaacgttactcatcgtgttggaaatcagcctgtaga
cacgaaaagtctcccattgaatgccgtctcaaatacttagattgcagtacgaaagatgat
cctgaacgtatcatatgggctaatagcacgcgggtgttttctatatgcgatcctaatgca
aatagtactttcgactatgggatttttcaaaacgcaatgctaaaagatgtcgtctccgat
aatttcatggataaatacttctactgtttatggtggggacttcagcagctcagttcgtat
ggtcagaatttggaaacgagcacattcgtttgggaaagcgcattttgcattcttatctcc
atagtcggtcttgttctgttttctctcttgattggtaatatgcagacctacctgcaatcg
atcacatcgaggctcgaggaatggaggcttaggagacgcgacactgaggagtggatgaag
catcgtcagcttcctcaacacctgcgagaaagagtaagacggtttgttcaatacaaatgg
ctggcaactcgaggagtcaatgaagaggctattcttagtagcttgccaattgacctacgc
cgtgaaatacaacgacatttgtgcttggatcttgttcgtcgagttccatttttcgctcaa
atggatgatcaactacttgatgcgatttgtgaacggttgagatcttctctaaacactgca
ggcacttttatagttcgtgagggtgatcctgtgaccgaaatgctcttcattatacgaggg
aaactagacagctcaacgacaaatggaggacggtctggctttttcaactcgatcacactt
agaccaggggacttctgcggcgaagaacttctcgcgtgggccctactctctagctcggca
aatttcccatcttccacacgaacagtcaaagcaatagaagaagtggaagcattttcacta
caagcggaagacctcaggttcgttgcaaatcagtttagacgtctacatagcaaaaaacta
caacacacattccgttattattcccaccactggaggacatggggtgcctgctttattcaa
gctgcgtggagacggtttaagaagagaaaaatggcacaaagcttgagctcgagagagtca
ttttctaatttgtttatcgagtcaagtttatttacacagcatgaaaatgtcgagtatcaa
aatctggaacacgttcctgatgataatgatgaggaagcggcagcttcctcccaggctatc
caacagctcggagtgacaattttggctaaaagatttgcaggcaatgcgcgaaagggggca
caaaggactagggatattgaattgcctaagatgatgaagcctcaagatcctgacttcttt
gctgagccttaa
DBGET
integrated database retrieval system
