KEGG   Amaranthus tricolor (tampala): 130818073
Entry
130818073         CDS       T09367                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
atri  Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:atri00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:atri01009]
    130818073
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atri03036]
    130818073
Enzymes [BR:atri01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130818073
Protein phosphatases and associated proteins [BR:atri01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130818073
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130818073
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 130818073
NCBI-ProteinID: XP_057540090
LinkDB
Position
7:27538916..27548528
AA seq 1208 aa
MGTELLRACLNEDDFDFPPVPPGFESFTSFKVKVEKADSEPCCSVSSNPSRQEPVHVKLE
PGLGGGGKISRSLRCRPSNNYGRYNQCSDEESDCEQLDQNFPTNSGLPKGVIRGCPECPN
CQKVIARWHPEAACRPDLEEVPVFYPSAEEFEDTLRYIEKIRPKAERYGICRIVPPSTWK
PPCLLKEKDIWEKAKFGTRVQKVDKLQNRDASRKQSKVYTNAKKKRRRCVRMGVECGPGN
GRTFELGEPGFGFEPGPDFTLDEFQRYANAFKDRYFRSESYTDSSIEKAKSTDCWEPSAK
DIEGEYWRVVEKPTEEIEVLYGADLETGVFGSGFPKFSAESCSDADEKYVKSGWNLNNLP
RLAGSLLSYENAEISGVQVPWLYVGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPGS
DALKLEAAMKKHLPDLFDEQPDLLHKLVTQLSPSILKSAGVPVYRCMQSAGEFVLTFPRA
YHAGFNCGFNCAEAVNVAPIDWLPHGLNAVELYREQRRKTTISHDKLLLGAAREAVKANW
ELNLLRKNTIDNLRWKDVCGRDGILATSLRARVDAENMRREFLCKQLKALKMENTFDATT
ERECDICFFDLHLSAAGCRCSPERFACLNHAKQLCSCSWDAKFFLFRYDIPELNLLVDAL
EGKLSAIYRWARLDLGLALSSCISKDNRPSMGISDAFPEHPKDNTACKSNLQPMVPFKSK
DVGVKNQTGLASSSGISSVDRGKFPDAVLALEATKIRPIKLVLQSKQNKPPINKVRGEVP
VYNPGDCTHQLPSKDTHSNRRSTLLEPPMKSPSHGQDDLICLSDDDDEPSNKPPCDEDSL
KAPEIERSNHKLNLCDLANAALAAEANLSLICDGHKDDCMSCSTSPNNEAEVKCETVALS
DEHNLSCHQGSIGSSIEKRDPDAYTPDSFHQQTTCAPNPGYGIKFRDESVIQRVIDEARF
FPGTPSCSQSSVDKYPRQKGPRIAKVVRRINCKVELLESGVVNPGNLWSTSRAIFPKGFK
SRVSYINFLDPTNLGDYISEILDGGSKGPLFMVSLEHCSNEVFVHMSPTKCWEMILERVN
QEISKQHKLGKTKLPPLQPPGSLDGLEMFGFTSPAIVQAIEALDKNRTCKNYWNSRPLSH
ISRCFQPQRNNQNPNNTENENIGRSDTILRRLIQKADTEELHLLLKFLINDHGCVTGIIN
DEIKNRSR
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggggacagaactcttaagagcttgtctgaacgaagacgattttgattttccaccagtt
ccacctggttttgaatctttcacctctttcaaggtgaaggtcgaaaaggctgacagtgaa
ccctgctgctcggtttcttctaatccttctcgacaggaacccgttcatgtaaaacttgaa
cccgggcttggtggtgggggaaagatttcgagatctttgagatgtagaccatctaacaat
tatggacgatacaatcaatgttctgatgaagaatctgattgtgagcaacttgaccagaac
ttccccacaaattctggccttccaaaaggtgtcatccgtggttgccctgaatgtcctaac
tgccaaaaggttattgctagatggcatcctgaagctgcttgtaggcctgaccttgaggag
gtgcctgtattctacccgagcgcagaggaatttgaagatacattaaggtatatagaaaag
atacggccaaaagctgaaagatatggaatttgccgtatcgttcctccttctacatggaaa
ccaccatgtcttcttaaagagaaagatatatgggaaaaggcaaagtttgggacccgtgta
cagaaagttgacaaactacagaatcgtgatgcatcgagaaaacagtccaaggtctatact
aatgccaagaagaaaaggagaagatgcgtgagaatgggtgttgagtgtgggccagggaac
ggaaggacctttgagctaggggaacctggttttggttttgaacctggtcctgatttcact
cttgatgaatttcagagatatgctaatgctttcaaggaccgatatttcaggagtgaaagt
tatacggattcaagcattgaaaaagccaaatctaccgattgctgggagccatcagctaaa
gatatagagggtgaatattggcgagtggttgagaagcctacggaagaaattgaggttctt
tatggggctgatctggaaactggagtttttggcagtggttttccgaaattctctgctgaa
agttgttcggatgctgacgagaaatatgtgaaatcgggatggaacttgaacaatctacct
aggcttgcaggttctctactttcctatgaaaatgctgaaatatcaggtgttcaagttcca
tggttgtatgttggaatgtgcttttcctcgttttgttggcatgttgaagatcatcacttg
tattctctgaattacatgcattttggtgctccaaaaatgtggtatggtgtccctgggagt
gatgctcttaaattggaggctgcgatgaagaagcatttgcctgatctttttgatgagcag
cctgacctcctccacaagttggttacccaactttctccatccatattgaaatcagctggg
gtaccagtctatcggtgcatgcagagtgcaggagagtttgtattgacctttccccgagct
tatcatgctgggttcaattgtggattcaactgtgcagaggcagtgaacgtagctcctatt
gattggcttcctcatggattaaatgcagtggagctttatcgtgagcagcgacgaaaaaca
actatatctcatgataaattgctacttggggcagctagagaagctgtaaaagctaactgg
gaacttaatttactaaggaaaaataccatcgataaccttagatggaaagatgtctgtgga
agggatgggatcttagccacgtctctcagggcacgtgttgacgcagagaatatgaggagg
gaatttctttgcaaacaattaaaggcactgaagatggagaatacatttgatgccacaacg
gaaagggaatgcgacatatgtttctttgatttgcacttgtcagctgctggttgtcgctgt
tcccccgaaaggtttgcatgtttgaatcatgcaaaacaattgtgctcatgtagctgggat
gccaaatttttcttgtttcgttatgatattcccgagttgaatctcttggtcgatgctttg
gaaggcaaattgagtgccatatacagatgggccagactcgatctcgggcttgcattgagt
tcttgcatatccaaagataatcgaccatctatggggattagtgatgcatttcccgagcat
cctaaagacaatactgcgtgtaagtcaaatttgcaacctatggtacccttcaaaagtaaa
gatgttggggttaaaaaccaaactggtttggcttctagttctggaatttcttcagttgac
agggggaagttccctgatgctgtactggccctggaagcgacaaagatccgtcctattaaa
ttggttctccaaagtaagcaaaacaaaccaccgatcaacaaagttagaggtgaagtcccc
gtatataatcccggtgactgcacacatcaattacctagtaaagatacacatagcaatagg
aggtccactttactcgaacctccgatgaaatctccttcacatgggcaagatgatctgata
tgccttagtgatgatgacgatgaaccatcaaataaacctccttgtgatgaggacagtcta
aaagctcccgagattgagaggtctaatcataaattgaatctttgtgatctagctaatgca
gccttggctgctgaagccaatctaagcttgatatgtgatgggcataaagatgattgtatg
tcttgttcaacttccccgaataatgaagccgaggtaaaatgtgaaacagtcgctctatcc
gatgaacataatctttcctgtcatcaaggttctataggttctagtatcgagaaaagggat
ccagatgcctatactcctgatagctttcatcaacaaacaacatgtgctcctaacccgggt
tatggaattaagtttagggatgaaagtgtcatacagagagttattgacgaggctagattt
tttcctgggactccatcatgtagtcaaagtagcgtagacaaatatcctcgccagaaaggt
ccacgcattgcaaaagttgtgcggagaatcaactgcaaagttgaactgctagaatctggg
gttgtaaatcctggaaatctatggagcactagcagagctattttcccaaaagggtttaaa
agtcgcgtcagttacataaatttcttggatcccacaaacttgggcgactatatctcggaa
attcttgatggtggatcgaaaggaccacttttcatggtatcactagagcattgctcaaat
gaagtatttgtacacatgtcacctactaaatgctgggaaatgattcttgaacgagtgaat
caggagatcagtaagcagcacaaattgggcaaaacaaagcttcctcctctgcagccacct
ggtagtttggatggacttgaaatgtttggtttcacctcccccgctatagttcaggctatc
gaagcattggacaagaatcgcacatgcaaaaattattggaactctcgtcccctttctcac
atctcacggtgttttcagccacaacgtaacaaccaaaacccaaataatacggaaaatgaa
aatataggacgatctgacacgatactcagaagattaattcagaaggcggacactgaagaa
ttacacttacttttgaaatttttgatcaacgatcatggttgtgtgacgggtattataaac
gacgagatcaagaaccggtcgagatag

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