Amaranthus tricolor (tampala): 130818159
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Entry
130818159 CDS
T09367
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
atri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130818159
03450 Non-homologous end-joining
130818159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atri03032
]
130818159
03400 DNA repair and recombination proteins [BR:
atri03400
]
130818159
DNA replication proteins [BR:
atri03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
130818159
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
130818159
BRCA1-C complex
130818159
NHEJ (non-homologous end-joining)
MRX complex
130818159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PspAA
Motif
Other DBs
NCBI-GeneID:
130818159
NCBI-ProteinID:
XP_057540203
LinkDB
All DBs
Position
7
Genome browser
AA seq
719 aa
AA seq
DB search
MIREDSSNNLRVLIATDCHLGYLEKDEIRRHDSFDSFEEICSIAEEKQVDFILLGGDLFH
ENKPSRMTLVRAVEILRQYCLNDSPVQFQVVSDQTVNFSNRFGHVNYEDPHYNVGLPVFT
IHGNHDDPAGVDNLSAVDILSACNLVNYFGKMNLGGSGVGQITIYPILIKKGSTSVALYG
LGNIRDERLNRMFQTPHAIQWMCPDAQEGCQVSDWFNILVLHQNRIKTNPKNAINEHFLP
RFLDFVVWGHEHECLIDPQEVTGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYR
PTKIPLQSVRPFEYAEVVLKDVPDIDQSDHNSILEHLDKVVRNLIEKSNRKAANKADAKL
PLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASRVKNRTEGKLDDSEKFRPE
ELNQQNIEALVAESNLKMEILPVNDLDIALHNFVNKDDKMAFHACLQHNLDETRSKIAGD
SDPVKFEEEDLIVKVGECLEERVKNRATNPKTFTFSAQSEELRGKRMAGSRGAASFSDDE
DDPTQISGAKSIARGRKAKVTELSSSYDVSETGKTSTRGRGRGKGRGKGATNMKQTTLDA
TLSFRRSQRSASVAASTAVHAIADEVDSASSDDEEYEARKVKNSSDDDDGLQVKNRKRAA
PKGRGRGSTQPSKRGRQSGSSSLQRMLMGNDDEDEDDDIPSRYNKSQLKITKDYGALRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgattagggaggattcgagcaataatttaagagtgcttatagcgaccgattgccacctt
ggttatttagagaaggatgagatacgccgtcatgattcattcgattcctttgaggagata
tgctcaatagcagaggaaaaacaggtggacttcatacttcttggtggtgatctctttcat
gagaacaagccatcaaggatgactttagtgcgggccgtggaaatccttcgtcaatactgc
cttaatgattcacccgtgcaattccaagttgtcagcgaccagaccgtgaacttttcaaat
agatttggtcatgtaaattatgaggaccctcattacaatgttggcttgcccgtgttcaca
attcatggcaatcacgatgatcctgctggagtggacaatctatctgctgttgatatcctt
tcagcgtgcaatcttgtcaactattttggtaaaatgaatcttggaggctcaggggttggc
cagattactatttaccctattcttatcaagaagggttcaacatctgtcgctctatatggc
cttggaaatattcgggatgaaaggttaaacagaatgtttcagacacctcatgctattcag
tggatgtgccccgacgcacaagaagggtgtcaagtttcagattggtttaatatccttgtt
ctccaccagaatagaataaaaacaaatcctaaaaatgctataaatgagcattttttaccg
cgattccttgatttcgtggtttggggccatgaacatgaatgcctaattgacccacaggaa
gttactggaatgggttttcatattacacaacctggttcttctgttgcaacatcacttatt
gatggggaatcaaagccaaagcatgttcttcttttagaaattaagggaaaccaataccgt
ccaaccaaaatacctctgcaatctgtgaggccctttgaatatgctgaggttgtgttgaaa
gatgtacctgatattgatcaaagtgatcataattcaattcttgagcatctagataaagtg
gtcagaaatctgattgagaagtctaacagaaaggcagccaacaaagctgacgctaagctt
ccattggttcgagtgaaggttgactactctggatttatgacaataaatcctcagagattt
ggacagaagtatgttggcaaggtggcaaaccctcaggatatcttgatattctcaaaggct
tcgcgggttaagaatcgaactgaagggaaattggatgattctgagaaattccgaccagaa
gaattaaaccaacagaatattgaggctttggttgctgagagtaatctgaaaatggagatt
cttcctgttaatgatttggatattgcactgcataattttgtcaacaaagatgacaaaatg
gcttttcatgcttgcttacaacacaatcttgacgaaacacgtagcaaaattgctggagat
tcagatccggtgaagtttgaggaagaagacttgattgttaaagttggagagtgtttggag
gaacgtgtcaaaaacagggcaacaaacccaaagacatttacctttagtgctcagtcagag
gagctcagaggtaaacgcatggcaggatcaagaggtgcagcatcttttagtgatgatgaa
gatgatcctactcaaatttctggagcaaagtctattgctcgaggcagaaaggcgaaagtt
acagaactaagttcatcctatgatgtttccgaaaccggtaaaacttctacgagaggaagg
ggaagaggaaagggtagaggaaaaggtgccaccaatatgaagcagacaactctcgatgca
actttgagttttcgccgttctcaaagatctgcatcagttgccgcttcaacggcagtgcat
gcaattgctgatgaagtcgattctgcatcaagtgatgatgaggagtacgaagctcgaaag
gtcaagaacagttcggatgatgacgatgggctccaagtaaaaaatcgcaaacgagctgca
ccaaaaggaagggggagaggttcaacacagccctctaagaggggaagacaatcagggagt
tcttcacttcaaaggatgcttatgggcaatgatgatgaagatgaggatgatgatataccg
agccgatataataagtctcaacttaagatcacaaaagattatggagctttaagacgataa
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