Amaranthus tricolor (tampala): 130818213
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Entry
130818213 CDS
T09367
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130818213
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130818213
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130818213
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130818213
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130818213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
DUF4718
Motif
Other DBs
NCBI-GeneID:
130818213
NCBI-ProteinID:
XP_057540272
LinkDB
All DBs
Position
7:complement(28423717..28434605)
Genome browser
AA seq
911 aa
AA seq
DB search
MLEFRQADIPALFLVFVVLPVVLYILLGKWSEASRKKERVKFLVEEAFVEPFRSEAMAAS
SDIPTVVPRSTTAFWECARCSIPATTRCSRCKSVRYCSGRCQIVHWRQGHKEQCQPPDDN
YSSFKPTSLAEVDSESSHKGAYDQYSDFSTPQPLGVNLSVDFPVGATASIDAKREKRASQ
KRATRKSSKEAPDIKDREVSISADAYLSSNPESSNKAGTRHKLRGRDPTNSEDGFSEIHI
INGSMSCDKYNEQRRALQQSSGVKSQTRESLSSSTRAMDLASGYNMPIREVASCREDLSK
RKNISQMASTCESLVSKSAADPECVKLSESAKCIRKAARGHPHMEKVRKGLGVSGSTKAI
GSMNLSKIARKVTSDINNDSHMKVKMLFPFEEFTKFFEIEVFDLRPRGLLNCGNSCYANA
VLQCLTCTKPLVIYLLNRTHSRTCRLNNWCLMCELEQHVHMLRDNAGPLSPSRILSHIRS
INCQMGDGSQEDAHEFLRLLVASMQSICLEEVGGEKQVHPILQETTFVQQTFGGRLRSLV
VCLRCNHESERYENIMDLTLEIFGWVESLEDALAQFTTPEDLDGENMYKCGRCAAYVRAR
KQLCIDEAPNILTIVLKRFQEGNYGKINKCITFPDMLDMVPFMTGTNDSPPLYMLYGVVV
HVDTLNASFSGHYVSYIKDLQGNWFSIDDTVVQPVPMSQVMSEGAYILFYMRSFPRPPRA
LMKNAKKPQAPKSSWSSVSKTNNSRKIGLDIHRANRVNQAMETYVDPEFMDFSDATTSDW
SLFTSSDEASFTSESTRDSFSTVDYKDNSNIDPYSSMFGAHERSSQRMVSCSMFSGSKPV
TRYISEEKGYILDSDHTVYPLDTMQVDGNRGQDSFPFYESFLSGSEYQNFVNYERTACDS
FIQTFADVHLQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagtttaggcaagctgatattcctgccctgtttctggtctttgttgtactacca
gtggttttgtacatcttacttgggaaatggagtgaggcttcacgcaaaaaagagagggta
aagtttctggttgaagaggcatttgtggagccttttagatcagaagcaatggcagcttcc
agtgatattcctactgttgtacctcgttcaactactgctttttgggagtgtgctaggtgc
agcattccagctacaacacgctgctctcgatgcaagtcagttcgttattgttctgggagg
tgccagatagttcactggaggcaaggtcacaaagagcaatgtcagccaccggatgataat
tactcatcctttaagcctacttcactagcagaagttgatagtgaaagtagtcacaaaggt
gcatatgatcagtacagtgacttttcaaccccacagccgcttggtgttaatttaagtgtt
gatttccctgttggtgcaacagcttctattgatgctaaacgagagaaaagagcctcgcaa
aagcgagctactcgcaaatcctctaaggaagcgccagatatcaaagatagagaagtttcc
atctctgctgatgcatacttgagcagtaatccagaatcctccaataaggctggaaccagg
cataagttaagaggtagggaccccacaaactcagaggatggtttttctgaaattcatatc
atcaatggctctatgagttgtgataagtataatgaacagagaagggcattgcaacaaagt
tctggagtcaaaagtcagacaagagaatcattatcgtcctctacaagagccatggatttg
gcttcagggtataatatgccaataagagaagtagccagctgcagggaagatctttcaaag
aggaaaaacatctctcagatggcctcaacctgtgagagcttggtatctaaaagtgcagca
gaccctgaatgtgtcaaattgtctgaatctgctaagtgtatacgtaaagcagcaagagga
catccacacatggaaaaagtgagaaaaggacttggtgtatcagggtctacaaaggccatt
ggttctatgaatttatcaaagatagccagaaaggtgacctctgacattaataatgatagc
catatgaaagtgaagatgctgttcccttttgaagaattcacgaagttcttcgaaattgag
gtctttgacttgaggcctcgaggccttttgaactgtggaaacagttgctatgctaatgct
gtgctgcagtgtttaacctgcacaaaacctctggtcatctacctgttgaaccgaacacat
tcaagaacctgccgcctcaataattggtgtctaatgtgtgagttagagcaacatgtgcac
atgttaagagacaatgctgggcctttgtctccaagtagaattttatcacacatacggagt
ataaactgccagatgggtgatggaagtcaggaagatgcacacgaatttttaaggcttcta
gttgcatcaatgcagtcaatatgtctagaagaagtgggtggtgaaaagcaggttcatccc
attttgcaggaaactacatttgttcagcaaacatttggtgggcgcctgagatcactggtt
gtctgtttgagatgtaaccatgaatcagaacgatacgagaacattatggatctgacattg
gagatctttggatgggttgaatcactggaagatgcacttgctcagttcactactcctgag
gatttggatggagagaacatgtacaaatgcggaaggtgcgctgcttatgtacgggccaga
aagcagctgtgcatagatgaggcccctaacattcttacaattgtcttgaagaggtttcag
gaaggaaattatgggaagataaacaaatgcatcacgtttccagatatgctggacatggtc
ccttttatgaccgggacaaatgacagcccaccactttacatgctttatggtgttgttgtg
catgtcgatacgctaaacgcttcattctctggacattatgtatcttacataaaggatttg
cagggaaattggttcagcatagatgatacagtggtccaaccagtgccaatgagccaggtg
atgtcggaaggagcatatatcttgttctatatgagatcctttcctcgaccaccaagagca
ttaatgaagaatgctaaaaagccgcaagcacctaagtcgtcatggtcttccgtgtctaaa
acaaataattcccgaaaaataggactagatattcacagagccaacagagtcaatcaggcc
atggaaacttacgttgatccagaattcatggatttttccgatgctacaaccagtgactgg
tctctgttcacaagttcagacgaagcatcttttaccagtgaaagcacacgagattcattc
agtacggtcgattataaagataattccaatatcgatccatattcctcaatgtttggcgct
catgaacgctcctctcagagaatggtttcgtgtagcatgttttcaggcagcaagcctgta
acaagatacatttccgaggagaaggggtacattttagattcagatcacacggtttatccg
ctcgatacaatgcaagtagacggaaatagggggcaggacagttttcctttttacgaatct
ttcctgtcgggtagcgagtaccaaaattttgtaaattacgaaagaaccgcctgtgatagt
tttattcagacttttgctgatgttcatctgcagtag
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