Amaranthus tricolor (tampala): 130818273
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Entry
130818273 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130818273
KO
K11790
denticleless
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130818273
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130818273
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_EML
MIOS_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
130818273
NCBI-ProteinID:
XP_057540371
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All DBs
Position
7:31117214..31121525
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AA seq
505 aa
AA seq
DB search
MEIYNSKSILHDIKSRELHGFKGRKRPLFTYSTSIEEQIDEPSCSRGVATSHNGESTPPM
SISFAKTIKNAHILGFTDEVGYMNLIDTRMKLKSSATHQENAEKAIVSSWVTHDNSVYDF
CWIKDDTRVLTASADHTIKVWDVDQKKCCAVLRGHSGSVKSVSNHPTNFDLLVSGSRDGS
FALWDLRCNTRQGTHWIMPNELVNEAHTTAKRKRSVKGKTASTTITSVLYLKDEASIATA
GAVDSVVKIWDTRNLRAPFAHACPLQDCGTETNGRHGITSLSQDLNGVLLSASCTDNRVY
LYNVLQLKKGPISSYTGSQIGSFFIKSSISPDASHILCGSGDGNAYIWQVNDPEQDPIAL
TSHEKEVTTVDWCLHEPGKIATASDDYTVRFWNVENRQCLLPRNCIRKRVSAFPRTDCKE
LSQQRDHPSSSTQDETVIQDQSLVELVKTPDATPSLFSRNRSLTGLNLNEAFDKTSESAA
MSPSSVLSPPSSIKKKTIRDYFVVY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagatctacaactccaaatcaatcctccacgacattaaatcaagagagcttcatggg
tttaaaggaagaaaacgaccattgtttacctatagtacatcaatagaggaacaaattgat
gagcctagctgtagtagaggtgttgcaacttcccataatggcgaatcgactcctcctatg
tctatttcttttgctaagacaataaaaaatgcccatattctgggttttaccgatgaagta
ggttatatgaacttgattgataccagaatgaagctcaaatcttctgcaacccaccaagaa
aatgcagaaaaggcaatcgtatcgagctgggtaacccatgataattctgtttatgatttt
tgctggattaaggatgatacccgtgttttgacagcttcagctgaccacactattaaggta
tgggatgtcgatcaaaaaaaatgttgtgcagtgctaagaggtcattccggcagtgttaaa
tctgtctctaatcaccctacaaattttgatcttcttgtatctggctcaagagatggttcg
tttgcactgtgggacctgaggtgtaatactcgccaagggacgcattggataatgccaaat
gaactggttaatgaagctcatacaacagctaaacgaaagcggtctgtaaagggaaagact
gcttcgacgactataacatcagttctctatctcaaagatgaagcctccattgccaccgca
ggagcggtagacagtgttgtaaagatttgggacacgagaaatcttcgagccccatttgcg
catgcttgtccactacaggattgtgggacagagacgaatgggagacatggtataacaagt
ttatcacaagatcttaatggggtgctgctttctgcatcttgtacggataatagagtatat
ttatataatgttcttcaactcaaaaagggtccgatcagttcctatacaggcagccaaatc
gggtcattttttataaagtcatcgattagtccagatgcatctcacatactatgtggatca
ggagatggaaatgcttacatatggcaggtaaatgatcctgagcaagatcccattgcttta
acaagccatgaaaaagaagtcacaacagttgattggtgtctacacgaaccgggaaagatt
gccactgcttcagatgattacacagttcgcttttggaatgtcgaaaacagacaatgtctt
ttaccaagaaattgcatccggaagagagtgagtgcatttccaagaaccgactgcaaagag
ctgtcccagcagagggatcatccgagtagttcaactcaggacgaaacagttatacaagat
caaagcttagtcgagttagtgaagacacctgatgccacgcctagtctattcagtagaaac
aggtcactgacaggactaaatttgaatgaggccttcgataaaacatctgaatctgcagcg
atgagcccttcttccgttctaagtcctccatcttccattaagaaaaaaactattcgagat
tattttgtagtgtattag
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