Amaranthus tricolor (tampala): 130818370
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Entry
130818370 CDS
T09367
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130818370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130818370
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130818370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
130818370
NCBI-ProteinID:
XP_057540507
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Position
7
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AA seq
484 aa
AA seq
DB search
MESDLGKLFIGGISWDTDESKLKEYFGQYGEVVEAMIMRDRATNRARGFGFIVFADPVVA
ERVVMEKHMIDGRTVEAKKAVPREDQQGLSRNNNLIQGSPGPGRTKKIFVGGLASTVTES
DFKKYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLQTFHQLNGKMVEVKR
AVPKELSPGPSRSPLVGYNNYGMGRASNFINTFAQGYNLNSIAGFGRLNPLVTGRTGLPP
FGNPGYGMGVNMEPGFSASYGANSNISNSQGFGRILGPFYNGNTNRYSTPVGYNAGNTRG
DSLANSMARNVWGNSSFSSPANPASPGAFLGSGSGNSGVSLGNNGANWGSSSSTSQGGGN
NPGYGSGNLGYGFNDGYGLGSEGYGRTLSSDSVPASTFSASTGGFDTPYGDLYRGGFDST
WHSSSPELEGSGSFGFGLGNATADIASRNSEGPIGGYSAANRQPNRGISAYKRPFEQQTV
ITRQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagatcttggtaagcttttcattggtgggatctcgtgggacacagatgaaagt
aagctgaaggagtattttggacaatatggagaagtggtggaggctatgatcatgagggat
cgtgccacaaatcgtgcccgtggatttggttttattgtctttgctgatcctgttgttgct
gagagagttgtgatggaaaagcacatgatcgacggccgaacagttgaagcaaagaaagca
gtccctagggaggatcagcagggtctgagtaggaacaataatctcatccaaggatctcct
ggtcctggacgaaccaaaaagatttttgtaggaggtttagcgtccacagttaccgagagt
gatttcaagaagtactttgagcagtttggtatcattacggatgttgtggtaatgtatgat
cataacacccaaaggccaagagggtttggtttcattacttacgactcagaagaagctgtc
gataaggtgttgctgcaaactttccatcaactcaatggaaaaatggtagaagttaagcgg
gcagtaccaaaagagttatccccaggcccgagtcgcagccccctagtaggatacaataat
tatggtatgggtagggctagcaacttcatcaatacttttgctcaaggttacaatcttaac
tctattgcaggatttggaagactaaatcctcttgtcaccggtcgaaccgggcttcccccg
tttggtaatcctggatatggaatgggtgtgaatatggagccaggatttagtgctagctat
ggtgcaaactctaacatcagcaacagtcagggttttggccgtattttgggacctttttat
aatggcaacacaaacagatacagtactcctgttgggtacaatgcgggtaatacaagaggt
gattctttggcaaactcaatggcaagaaatgtgtggggaaatagttcttttagcagtcct
gcaaatccggctagtcctggggcttttttgggatctggtagtggcaattccggtgtgtca
ctcggaaataatggagctaactggggttcatcttcttccacatcccaaggtggaggtaat
aatcctggatatggtagtggaaatctcggttatggttttaatgatggctatggattggga
agtgagggttatggaagaactcttagttcggattcagttccagcttctactttttctgca
tccacaggtggttttgatacaccttatggagacctatatcgtggtggttttgattcaaca
tggcactctagttctcctgagcttgagggatctggttcatttggttttggtcttggcaat
gcgactgcggatattgcttctagaaattctgagggtccaattggaggctacagtgcagca
aacagacaaccaaatagaggaatttcagcatataaaaggccattcgagcagcagacggta
attactaggcagtaa
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