Amaranthus tricolor (tampala): 130818713
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Entry
130818713 CDS
T09367
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130818713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130818713
Membrane trafficking [BR:
atri04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130818713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Phage_lysozyme
Motif
Other DBs
NCBI-GeneID:
130818713
NCBI-ProteinID:
XP_057540867
LinkDB
All DBs
Position
7:11120747..11132293
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AA seq
1447 aa
AA seq
DB search
MSCLELQPGSLACMVNTEIGAVLAVMRRNVRWGNHFTSVDDQQEHSLIQSLKTLRKKMFT
WHAQWHSVNPVMYLQPFLDVIQSEETSAPITSVALSSVYKILMLDMFDMNTIGIHNTMHL
IVDSVTNCHFEVTDPTSEEVVLMKILQVLLSCVKSKVSVALSNQHICNIVDTCFRVVQQT
SAKSELLQRIARHSMHELVRSIFSRLPEVDSTCHKHAGGGNLTNDEIQQVIGDFSFAAPQ
SGSKDSTPQLDQLAIAYSTSSPSTTLVDGPTDGSATKEVTQYDSHLMTQKFGVPCMVEVL
HFLCSLLNITEHVDQVRKSNSLAFDEDVPLFSLTLINSAIELGGSSFHRHPRLLNLIQDN
LFCSLMQFGLTTSPLILSMVCSIVLNLYLHLRSKLKLQLEAFFSSVILRLAQSRYVASYQ
QQEVAMEALVDFCRQKTFVMELYANYDCDISSRNIFEELVTLLSKSAFPVNSPLSTMHIL
ALEGLIAAIQGIAERIGDEQVGRANVPLAFEEYKPFWLFKCDSYEAPVHWVPFLRKMKFI
KQQLSTGADHFNRDPRKGLEFLQKIRLLPEKLDAQSVAFFLRFTCGLDKNVVGDFLGNHE
EFNVQVLDQFAQTFDFKGMTLDTALRIFLETFKLPGEAQKIQRVLEAFSARYYEQSPHIF
ANKDAALLLSYSIILLNTDQHNAQVKKKMTEEDFIRNNRCINGGNDLPRELLSGLYHSIC
ENEIRISPEQGSGPCELRQSHWIDLMQKTQNTAPYIVAAFKPYLDDDMFAIISGPTVAAI
SVVFDHAEEEDAYQLCIDGFLAAAKIAAYFHLDSVLDDIVSSLCKFTTLLNPSYYEDFLY
AYSNDTRARMATTAVFTIANSYGDYIRTGWQNIINCILRFFEFGFLSSFSVSDVADEPAF
STVSGNVKPLANSISLPHMPTVAPKKPSGLMGRFSQLLSFEVEEPISQPSEEELAAQQCI
LEIVQKCQINNIFLECKFLQADSLMHLVGAVVAEQAQTETRYPEDEVNAVFCLELLIAIT
LNNRDRISLLWQSVYEHISNIVQSIVVPCALVEKAVFGLLRICRRLLPYKENLVDELLRS
LQLVLKLDARVADAYCEQITQEVGQLVRTNAHCIRSQMGWRVILSLLAITARHPDASEAG
FEALCFIMGDGAHLLPLNFILCVDGARQFAESRVGEVERSVHALDLMSGSLTCLVQWARE
SKEVMNEDAAAAAMFTQNIGEMWLRLVQGLRKLCLDDREAVRNHSLFSLQKCLSGVQEIH
LSHNQWLQCFDVVIFPLLDDFLEIARGPSSKTYRNMEAVLVVAIKLLSKVFLLSINEVMQ
LPRFEKLWMSVLSQMESYMKVKIRGKKSEKLQELVPELIKNSLLIMKAGEVLKPENGSSG
DTSSLWELTWSHVNKLAPSLQSEVFTDAELDKARARGQTSQGNIEALQVSTCVSVVSTTT
KIVAQEG
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtttagagttgcaacctggttctttggcgtgtatggttaacacggaaataggt
gctgttttggccgtaatgagaaggaatgtcagatggggaaatcattttacatcagttgat
gatcagcaagagcactctctgattcagtcccttaagactctgagaaagaaaatgttcaca
tggcatgctcaatggcatagtgttaatcctgtcatgtatctccaaccttttctagatgtc
attcaatccgaagaaactagtgctcccattacgagtgttgctttgtcatcagtgtataaa
atcttaatgcttgatatgtttgatatgaataccatcggtattcataatacaatgcatttg
attgttgattctgtgacaaactgtcattttgaggttactgatccgacatctgaagaggtg
gtactaatgaagatacttcaagttcttttatcttgtgtaaaaagtaaagtatcagttgct
ttgagtaatcagcatatctgcaacatagtggatacttgttttcgggttgttcagcaaact
agcgcaaagagtgagttattgcagcgcattgctcggcattcaatgcacgaacttgtccgc
tcaattttttcacgacttccagaagttgacagtacgtgtcacaagcatgctggtggaggt
aacttaactaatgatgagattcagcaggttattggcgattttagtttcgctgctccccaa
tctggttctaaagatagcactccacaacttgatcaactggcaattgcatattcgacttct
agtccttccactaccttggttgatggtccaactgatgggtctgcaacaaaggaagtcacg
caatatgattcacatctcatgactcagaaatttggagttccgtgtatggttgaggtactt
catttcttgtgttcgttgttgaacattactgaacatgtggatcaggttcggaaatccaac
tctttggcttttgatgaagatgtgccccttttctccttgaccttgattaattcagccatt
gagttaggtggatcttcattccataggcacccacgtttactgaatttgattcaagataat
ttattctgcagtttgatgcaatttggtttaactacaagtccactcattctttccatggtt
tgtagcattgttctgaatctttatttgcacttgcgttctaagctgaaactacagttggag
gctttcttttcttctgtgattttgaggcttgcacagagcaggtatgtggcttcttatcag
caacaggaagtggctatggaggcccttgttgacttttgtaggcagaaaacatttgtaatg
gagctgtatgctaactacgattgtgatattagctctaggaatatatttgaagagttggtt
actttgttatcaaaaagcgcatttcctgtcaatagtcctctctccacgatgcatattctt
gctttggaaggcttaattgcagccatccagggtatcgctgagaggattggggatgaacag
gttggtcgggctaatgttcccctcgcatttgaggagtataagccattttggttgtttaag
tgtgatagttatgaggcacctgttcactgggttccatttcttcgcaaaatgaagtttatc
aagcagcaattgtcgactggcgctgatcattttaatcgagatcccagaaaaggtttagaa
tttcttcagaaaatacgcttgctccctgaaaaacttgatgcgcaaagtgtagccttcttt
ttaagatttacttgtgggttggataagaatgttgttggggatttcctgggaaatcacgag
gagtttaatgttcaggtccttgatcaatttgcacagacttttgattttaagggcatgact
ttagatactgcattacggatatttttggagacattcaaactcccaggagaggcacaaaag
atacagagagttctcgaggcattctcagctagatactacgagcaatcgccgcacatattc
gctaacaaggatgctgcacttttgttgtcctattcaattatactgcttaatactgatcaa
cacaatgcacaggtgaaaaagaagatgacagaggaggattttatacggaataataggtgt
atcaatggtggtaatgatcttcctcgggagttgctgtccgggttgtatcattcaatctgt
gagaatgagatacgtatttctccagagcaaggttctggaccgtgtgaattgaggcagagc
cattggattgatcttatgcagaaaacccagaatacagccccttatatagtagcagctttt
aagccatatctcgatgatgatatgtttgctataatatcaggaccaactgttgctgctatt
tctgttgtatttgatcatgcagaagaggaggatgcttaccaactttgcattgatggcttc
ttagctgctgctaagattgcagcatacttccatcttgattctgtgctagacgatatagtg
agctccctttgcaagtttacaactctcttgaacccatcatattatgaggattttctttat
gcttatagtaatgacacaagggctagaatggcaacaactgctgtgtttactattgccaat
agctatggtgactatattcgaacaggctggcaaaatattataaactgcatcttgcgtttt
tttgagtttggctttctttcttccttttctgtaagtgatgttgctgatgagccagcattc
tccactgtctccggaaatgttaagcctcttgctaactcaatatctttgcctcacatgcca
actgttgctcctaagaaaccttctgggctgatgggccgctttagtcagctcctatccttt
gaagtagaggagccaatatctcagccctctgaagaagaacttgctgctcaacagtgtatc
ctggagatagttcagaagtgccaaatcaacaacatttttttagagtgtaaatttttacaa
gcagattccttgatgcatctagtaggtgctgttgtggcagagcaggctcagacagaaact
agatatcctgaggatgaagttaatgctgttttttgtcttgagttgttaattgctatcact
ctgaacaatcgagatcggatctcactattatggcagtctgtctatgagcatatctctaat
attgttcaatcaatagtggttccttgtgctttagtagaaaaggccgttttcgggctttta
agaatttgccgacgcttactgccctataaagaaaatttagttgatgaacttttgaggtca
ctccagttagttttgaagcttgatgctcgagttgctgatgcttattgtgaacaaattaca
caggaagtaggacagcttgtgaggacaaatgcccactgcattagatcacaaatggggtgg
cgtgtgatcttgtctcttcttgccattacagcgcggcatccagatgcgtctgaggctggg
tttgaagcactatgttttataatgggcgacggcgcacacctattacctttaaacttcatt
ctctgtgttgatggagcaaggcaatttgctgaatctcgtgttggtgaagtggagcgatct
gttcatgcattggatttgatgtcaggatcattaacttgcctagtgcagtgggcacgtgag
agcaaggaagttatgaatgaggatgctgctgcagctgccatgttcactcagaacattggt
gagatgtggttgagacttgtgcaaggattgagaaagctttgtttggatgacagagaggca
gttcgaaaccactctcttttttcactccaaaaatgcttgagtggagtgcaagagatccat
ctttcacataaccaatggttacagtgttttgatgtggtcattttcccactgctggatgat
tttcttgaaattgcacgagggccgtcttcaaaaacttacagaaacatggaagcggtgctt
gtggttgccatcaagctcctgtctaaagtttttttactctctatcaatgaagttatgcag
ttgccaagattcgaaaaactgtggatgtccgtattaagccagatggaaagttatatgaag
gtcaaaattagaggaaaaaagagtgagaaacttcaggaacttgttcctgaactcatcaag
aactcgttgcttataatgaaggcaggagaagtccttaaaccagaaaatgggtcaagtgga
gatactagtagtttatgggagttaacatggtcacatgtgaacaaacttgcaccttctttg
caaagtgaagtgtttacagatgctgaattagataaagccagagctagaggacagactagt
caaggtaatatagaagcactccaagtctctacctgtgtcagtgtggtttctaccacaacc
aaaattgtggctcaagaaggttaa
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