KEGG   Amaranthus tricolor (tampala): 130818724
Entry
130818724         CDS       T09367                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03030  DNA replication
atri03410  Base excision repair
atri03420  Nucleotide excision repair
atri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130818724
   03410 Base excision repair
    130818724
   03420 Nucleotide excision repair
    130818724
   03430 Mismatch repair
    130818724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130818724
   03036 Chromosome and associated proteins [BR:atri03036]
    130818724
   03400 DNA repair and recombination proteins [BR:atri03400]
    130818724
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130818724
  DNA Replication Termination Factors
   ELG1-RFC complex
    130818724
Chromosome and associated proteins [BR:atri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130818724
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130818724
  Check point factors
   HRAD17(Rad24)-RFC complex
    130818724
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 AAA RCF1-5-like_lid Rad17 Sigma54_activ_2 RuvB_N AAA_5 AAA_22 Mg_chelatase DUF815 AAA_11 AAA_2 ABC_tran AAA_23 RsgA_GTPase AAA_lid_RFC1 Spore_III_AA nSTAND3 nSTAND6 NB-ARC AAA_16 ATPase_2 RNA_helicase NPHP3_N Ig_TgrO1 Prenyltransf
Other DBs
NCBI-GeneID: 130818724
NCBI-ProteinID: XP_057540891
LinkDB
Position
7:complement(11326427..11341314)
AA seq 354 aa
MLWVDKYRPKSLDKVIVHQDTAQNLKKLVTEQDCPHLLFYGPPGCGKKTLIMALLREMFG
ASADKVKVENKGWKIDAGTRTIEIELTTLSSTHHVEMNPSDVGFQDRHIVQEIIKEMARN
RPIDTKGKRGFKVLVLNEVDKLSKEAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSR
CLNVRVNAPKNEEIVKVLEFIGKKESLELPPGFAARVAAKSNRSLRRAILLFETCRVQQY
PFTSNQPIPPMDWEEYISEIASDIMKEQSPKRLFEVRGKFYELLVNIIPPEIILKRLLSE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctatgggtagacaaatatcgacctaaaagcctagacaaggttatagtccaccaagat
actgcccaaaatctcaaaaaactggtaacggagcaagattgcccacatttgctgttttat
ggacctcctggttgcggcaagaaaaccctaattatggcccttcttagggagatgtttggc
gctagtgctgataaggtcaaagtggagaacaaaggatggaagattgatgctgggactaga
acgattgaaatcgaacttacaactctatccagcactcatcatgtagaaatgaacccaagt
gatgttggattccaggatagacacattgttcaagagataattaaggagatggctcggaat
cgaccaattgacactaaagggaagcggggattcaaggtgttggttcttaatgaagttgat
aaattgtccaaagaagctcaacattcattacgaagaactatggagaagtatagttcatca
tgtaggcttattctttgctgcaatagctcatctaaggttactgaagcagttcgttctcgt
tgtctaaatgtgcgcgtcaatgctccaaagaatgaagagatagtcaaggtactggaattt
atagggaagaaagaaagcttggaacttccgccaggattcgctgctcgtgttgctgccaaa
tctaatcggagtctaagaagagcaatactgttgttcgagacttgtcgtgtccaacaatat
ccttttacgagtaatcagccaataccccctatggattgggaagaatatatctctgagata
gcatcagatattatgaaggagcagagccctaaaaggctctttgaggttcgaggaaagttc
tatgagctgttagttaatattatacctccagaaattattcttaagagacttctttctgag
ttattgaagaaactagacgcggaactgaagcatgaagtttgccattgggctgcctattat
gaacatcggatgcgccttgggcaaaaagccatattccatcttgaagcatttgtggccaag
tttatgagcatttacaaggctttccttattgcaactttcggttga

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