Amaranthus tricolor (tampala): 130818797
Help
Entry
130818797 CDS
T09367
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130818797
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atri01009
]
130818797
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130818797
03036 Chromosome and associated proteins [BR:
atri03036
]
130818797
Protein phosphatases and associated proteins [BR:
atri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130818797
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130818797
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130818797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
130818797
NCBI-ProteinID:
XP_057540992
LinkDB
All DBs
Position
7:27623555..27636925
Genome browser
AA seq
540 aa
AA seq
DB search
MDMDFNGDLLSLDAELLQLPEVSPLALKSNPFLAQDLFEQWLSLPETNRLVKSLVSDVKS
GNALNVAGNASSTNAAASNSIPSMFPAGSAPPLSPRSSSGSPRVMKQRAAPSSLGSPLKV
LSEPVKELIPQFYFQNGRPAPKELKERCLFRINQFFYGHTEGLPMNAEFKAVTKEICKLP
SFFSTVLFQKIDVNGTGFVTRDAFVDYWVNGNMLTVDIYSQIYTIMKQPDHKFLTQDDFK
PVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRAGNGQLTFKELKRGNLIAAM
QQADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRI
FCQVPRKFTSTVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGIITRNEMQFF
YEEQLHRMECMAQEPVLFEDILCQIIDMIGPENESYFTIQDLRGSKLSGSVFNILFNLNK
FMAFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatatggattttaatggagatttgttatctctagacgctgaactattgcagttacct
gaggtttcgcctttagctcttaaatcgaatccttttctcgcgcaagacctctttgaacag
tggctttcgcttcccgaaaccaatcgtctggtgaaatcactagtcagtgatgtgaaatct
gggaatgccttaaatgttgctggaaatgcttccagtacaaacgctgctgctagcaattca
ataccgtccatgtttcccgctgggagtgcacctccactttcacctaggagctcatcaggt
tcacctcgtgttatgaaacagagggcagctccttcttctctcggaagtcctcttaaagta
ttaagcgaaccagtaaaagagctgataccacagttctatttccagaatggccgtccagca
ccaaaagaactgaaagaaaggtgtttgtttagaataaatcagtttttctatggtcacaca
gagggcctgcctatgaatgcagagttcaaagctgttacgaaagaaatttgtaagctgcca
tccttcttctccactgtccttttccaaaagattgatgttaatggcacaggatttgtcacc
agggatgcttttgttgattattgggtcaatggaaacatgttgaccgtggacatatatagc
caaatatatactattatgaagcaaccagatcacaaatttttgacgcaggacgactttaaa
cctgttcttcgagaacttttggcaactcatccgggattggaatttttacaaagtacgcca
gagtttcaggagagatatgctgaaactgtaatatacagaattttttactacattaataga
gcgggaaatggtcagttaaccttcaaggagctgaagcgtggaaatttaattgctgctatg
caacaagctgatgaagaagaggacatcaacaaagttctgagatatttctcatatgagcac
ttctatgtgatatactgcaagttttgggagttggacacagaccatgatttcttgattgat
aaagagaacctaattagatatgggaatcatgcgcttacttacagaattgttgatcgaata
ttttgccaggttccaagaaagttcactagtactgttgaaggcaagatgggatatgaagat
tttgtttacttcatactggcagaggaggataaatcatcagaacctagtcttgaatattgg
tttaaatgcatagacttagacgcaaatgggatcatcacaagaaacgaaatgcagttcttt
tatgaggagcagttgcatcgaatggagtgtatggctcaagagccagtgctttttgaagac
atactgtgtcagatcattgatatgattggacctgagaatgagtcttattttaccattcag
gatttaagaggaagtaaactttcaggaagtgtttttaatattctctttaatctaaataag
tttatggcctttgagacccgcgatccattccttattcgtcaggaaagggagaatccaaac
ttgacagaatgggatcgctttgcgcatagggagtatattagactgtccatggaagaagat
gttgaagatgcatccaatggaagcgcagaagtttgggatgaatctcttgaggctcccttt
tga
DBGET
integrated database retrieval system
