Amaranthus tricolor (tampala): 130818841
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Entry
130818841 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130818841
KO
K12874
intron-binding protein aquarius
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130818841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130818841
Spliceosome [BR:
atri03041
]
Complex B
Other components
Prp19-related factors
130818841
Complex C
130818841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD-helicase
ResIII
UvrD_C_2
AAA_22
SLFN-g3_helicase
AAA
Parvo_NS1
AAA_16
Motif
Other DBs
NCBI-GeneID:
130818841
NCBI-ProteinID:
XP_057541058
LinkDB
All DBs
Position
7:4140575..4158854
Genome browser
AA seq
1523 aa
AA seq
DB search
MTKVYGTGVYDFKRHRVAEYPLEISHNINPESIPLSNAPNSISLAEIKKDPLTKIAADNW
LNSNPTNTFNAELVKDIYNKELLVKTGRKPVPLQRVMILEISQYLEKYLWPHFDAQTATF
EHVMSMILMINEKFRENVAAWVCFHDRKDVFKSFLESVLRLKDQADRFSIAEKTNYLVFM
INVFQSFEDEVVSNTVLRLASLQCWHSLSYGRFQMELCLNPDLIKKWKKMTKAEAKKAKK
RGEDYDPSNSLEATFLRNLMVEFLVILDSEVFFSAQHDDLDGNNSNGSQEVDDACVLFCE
RFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYTHARGKLFSQLVDLLQFYETFE
INDHEGTQLTDDEVLQAHYERFQSFQLLAFKRIPKLRELALANVGAIHKRVDLSKKLSVL
APKELQDLVCSKLKLISKNDPWSARVDFLIEIMVSFFEKQKSQKEAINALPLYPNEQIMW
DKSLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLA
YINNEGETAFRGWSRMAVPIREFKITEVKQPNIGEVKPAAVTAAITYSISSYRAHIRSEW
DGLKEHDVLFLLSIRPSFEPLSAEEASKATVPQRLGLQCVRGCEVIEIRDEEGGLMNDFT
GRIKREDWKPPKGELRTVTVALDAAQYHMDVTDIAENGAEDVYGTFNVLMRRKPKENNFK
AILESIRDLMNETCIVPDWLHNIFLGYGNPSAAQWTNMPDLLEIVDFKDTFLDADHLRNS
FSNYQISFTDPDGSENLCPEPPFRIRLPKTLKSNAEALPGNKSSISASVDGDTTAIQERL
VVESYIPPDPGPYPQDKPKQNTVRFTPTQVGAIISGVQPGLTMVVGPPGTGKTDTAVQIL
NVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPVRYLLRLGQGEQELATDLDFSRQGR
VNAMLVRRLELLGEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWEQFLAACADNKEK
PTFVQDRFPFKEFFSNAPQPIFSGESFDKDMRAAKGCFRHLKTMFQELEECRAFELLKST
VDRANYLMTKQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQILEIETFIPMLLQR
QEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGRAR
PSIAKLYNWRYRELGDLPYVKQEPIFLRANSGFSYDYQLVDVPDYNGKGESAPSPWFYQN
EGEAEYIVGVYIYMRLLGYPANKISILTTYNGQKFLIRDVISRRCVPYGFIGPPNKVTTV
DKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYELQPTF
QRLLQRPDHLALNLMENTPFTERGIEDTGPVYLVSGVDEMSNIVNSKMHQIDQARMMSIH
YNMMYVGQGDASVVQSFQNGQQNLTSVNDMDSESSVLENGVNGDIPPGSEVTNMEEEKSG
QNGAVAVEDLADGDVPAASNMEE
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagtctatggaactggagtttacgatttcaaacgccatagagttgctgaatac
cctcttgaaatttcccacaatatcaaccctgaatcaatacctctttctaatgctcccaat
tctatcagtcttgccgaaatcaaaaaagacccacttactaaaattgctgctgataattgg
ctcaattctaaccctacaaacacttttaatgctgaattggtgaaggatatttataataaa
gagttgcttgttaaaactggtagaaaacctgttcctttgcaaagggttatgattttggag
attagtcagtatttggagaagtatctgtggccacattttgatgctcaaactgctactttt
gagcatgttatgtctatgattttgatgattaatgagaagtttagagagaacgtggctgct
tgggtttgcttccatgataggaaagatgtattcaaatcattcttggagagtgttcttcgg
cttaaagatcaggcagatcgtttcagtattgcagagaagaccaactatttagtcttcatg
attaatgtctttcagagttttgaagatgaagtagtcagcaatactgttctaagacttgcg
agtctgcaatgctggcatagcttgtcatatggtcgtttccagatggagctatgtctaaat
cctgatttgataaagaaatggaagaaaatgactaaagcagaagccaagaaagcaaaaaaa
cgtggagaggactatgatccatctaattctctagaagcaacgttcttgagaaatctcatg
gtggagttcttggtgatattggattccgaagtgtttttctccgcacaacacgatgattta
gatggaaataattcaaatggttcccaagaagttgatgatgcttgtgtcttgttttgtgag
aggtttatggaattccttattgatttattgagtcaattgccaaccaggaggtacttgagg
cctttagtggctgatgttgcggttgttgctaaatgtcatttaagtgcgctttatactcat
gcaaggggaaaattgttttcacaattggttgacttgctacaattttacgaaacttttgag
atcaacgatcacgaagggacacaattgactgacgatgaggtccttcaagcgcattatgag
cgctttcaatcttttcaattgcttgcttttaagagaatcccaaagttgagagagctggct
ctagctaacgttggtgcaatacacaagcgtgttgatctctctaagaaactgtctgttctt
gcacctaaagagctccaggatttagtgtgttctaagctcaaactaatttcaaagaacgat
ccatggtcagcgagggttgattttcttattgaaattatggtttcctttttcgagaaacag
aagtctcagaaggaagccataaatgctctcccactatatcctaatgagcaaatcatgtgg
gataaaagccttgtaccaagcattaactactctggagaaggatgtctggctctcccaaaa
cttaaccttcagtttttaacccttcatgactatttattgagaaattttaatctttttcgt
ctcgagtcaacatatgaaatacgagaggatattcaggaagctgtgccacatcttcttgcc
tatatcaataacgaaggggaaacagctttccgtggttggtcaagaatggctgtaccaata
agggaattcaagattactgaggtgaagcaacctaacattggggaggtgaaacctgcagca
gtaacagcagcaattacttatagtatttctagttatagagcacacatcagatctgaatgg
gatggacttaaagagcatgatgttctgtttttgctttctatacgcccttcatttgagcca
ttgagtgcagaggaagcttctaaggcaactgttcctcaacgtcttggtcttcagtgtgta
cgcggatgtgaagtaatagagattcgagacgaggaagggggcttgatgaatgattttacc
ggaagaattaaacgtgaagactggaaacctcccaaaggtgaacttagaactgtaacagtt
gctctagacgcagcacaataccacatggatgttacagatattgcagagaatggagctgaa
gatgtgtatggaacatttaatgtgctgatgcgcagaaagccaaaagaaaataattttaag
gcaattttagaatccattcgagatcttatgaatgaaacatgtatagttcctgattggttg
cacaatatatttttgggttatggaaacccctcagctgcccaatggactaacatgcccgac
cttctagagattgtagattttaaggatactttcttggatgctgatcatttgagaaacagt
ttttcgaactatcagatatctttcactgatccagacggttcagaaaatctgtgtccagag
cctccatttcgaattaggcttccaaaaacgctgaaaagcaatgctgaagctcttcctgga
aataaatcatctatatctgcttctgttgatggtgacactacagcaattcaagaaagactt
gttgttgagtcttatattcctcctgatccgggtccttacccacaggacaagccgaaacaa
aatacagtcaggtttacccctactcaggttggggcaattatctctggtgtgcagccaggc
ttgacaatggtggtaggtccacctggtactggaaaaactgatactgctgtgcaaatttta
aatgttctttatcacaactgtccttctcagagaacattaattataacacactccaatcag
gctctcaacgatctatttgaaaagataatggagagagatgtgcctgttcgctatcttctt
cgattaggacaaggtgagcaagagttagcaactgatctagacttcagtcgtcaaggtcgt
gtcaatgcaatgcttgtgcgacgtttggaactgcttggtgaggtggagcggctagcacgt
tcacttcagcttcctgaggatgtgggctatacctgtgaaacagctggttacttttggttg
cttcatgtctactcacggtgggagcaatttcttgctgcttgtgctgataataaagagaaa
ccaacttttgttcaagatcgattcccattcaaagagttcttttctaatgctcctcagccc
atctttagtggagagtcctttgataaggatatgcgggctgccaaaggttgctttcgccat
ctcaaaactatgtttcaggagcttgaagagtgtagggcatttgaattgctgaaatcaact
gtggatagagcaaactacctaatgactaaacaggcaaaaattgttgctatgacttgcaca
catgcggctctcaagaggaaggattttcttcagttaggatttaagtatgataacctgtta
atggaagaaagtgcacaaatcctggaaattgagacttttattccaatgttattgcagcga
caggaagatggttatgcacgtcttaagcggtgtatattaattggtgatcatcaccagctg
cctcctgttgtaaagaacatggcctttcagaagtatagccacatggatcaaagtctcttt
actaggtttgttcgtctgggcataccatatattgagcttaatgctcagggacgagcacgc
ccaagcatagccaaactttataattggaggtatagagagttgggagaccttccttatgtg
aagcaagaaccaatttttcttagagcaaattcaggattttcttatgactatcagttagtg
gatgtgccagactataatggtaaaggtgaatctgctccttcgccttggttctatcagaat
gagggtgaggctgaatacatagttggtgtttatatatacatgcggttacttggttatcct
gcaaataaaatttccattttaactacttataacggccagaaatttctcattcgtgatgtt
atcagtcgaaggtgtgttccatacggttttattggccccccaaacaaggtcacaacagtt
gataagtttcaaggtcagcagaatgactttatcttattgtctctggtacgcactcgcttt
gtgggtcatttacgtgatgtgagaagattggttgttgcaatgtctcgtgcacgacttggc
ctctatgttttctgtcgtcgttcattgtttgagcagtgctatgaactacagccgactttc
caacgcctgcttcagagacctgaccaccttgcattaaacttgatggagaatacacctttt
acagagcgaggtattgaggatacagggccagtctatcttgtgagtggcgtggacgagatg
tctaatattgtgaactccaaaatgcatcagattgaccaggcaaggatgatgagcattcat
tacaacatgatgtatgtcggacaaggagatgcttctgtggttcaatcattccagaatggg
cagcagaatttgacctcagtgaatgacatggacagtgaaagttccgtgttggaaaatggt
gtaaacggggacataccgcctggtagtgaagttactaatatggaggaagagaaatcaggt
caaaacggagctgtggcagtagaagatttagcagacggtgacgttcctgctgcatccaat
atggaggagtaa
DBGET
integrated database retrieval system
