Amaranthus tricolor (tampala): 130819411
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Entry
130819411 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130819411
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130819411
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130819411
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130819411
03036 Chromosome and associated proteins [BR:
atri03036
]
130819411
03400 DNA repair and recombination proteins [BR:
atri03400
]
130819411
Peptidases and inhibitors [BR:
atri01002
]
Metallo peptidases
Family M67
130819411
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130819411
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130819411
BRISC complex
130819411
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
130819411
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
130819411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
130819411
NCBI-ProteinID:
XP_057541301
LinkDB
All DBs
Position
1:5721579..5737191
Genome browser
AA seq
394 aa
AA seq
DB search
MSLTKVKMSEEVWLTCVTHAFSTETEEIMGLLLGDIHCSKSGATTALIWGASPQPRSDRK
KDRVETNPEQLAAASAQAERMSSTTGRRTRVIGWYHSHPKITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFYEDKASKDGNIQVIAFQSLDGKQSCISGPLALSLVHTNTIVDVESSLSS
NNASRFSGKTEQPEQDTGDSKTAVYKAINAFGETDPMDMSDGMQEAMHRSHLEMSGAEYI
RKEIPLHVLPASSLLELEAPLTSFTDLQRVLYEEEKAAYNQSISQNIRDGKVHPLTFIHH
TSTYQASMCKLMEYCLAPAIEALEDRLRENEFRLGMLTEEAKVLEEASKGTEGTIGSPHR
FDRYRGSPARAPTESINTRSPLPASPSSKSRKGF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaacaaaggtgaaaatgtctgaagaagtgtggttaacttgtgttacccacgct
ttttctactgaaactgaagaaatcatgggtcttcttcttggcgacattcactgctctaaa
agtggcgcaacgactgcattgatatggggtgcatcgcctcagcctcgatcggataggaaa
aaggacagagtggagactaatcctgaacagttagctgcagcatcagctcaggcggaaagg
atgagctctacaactggaagaagaactcgagtgattggatggtatcattctcatcctaaa
attactgtcctcccatcccatgttgatgtgcgtactcaggcaatgtaccagcttctagat
tctggtttcattgggcttatattttcttgtttttatgaagacaaggcttctaaggatgga
aatattcaagtcattgccttccagtccttggatgggaagcagagctgcatatcaggacct
cttgctttatctcttgtacatacgaatactatcgtggatgttgaatcatcattgagctcg
aataatgcatcaaggttctctggaaagactgaacaacctgaacaggacacgggtgattca
aaaactgctgtatataaggcaattaatgcttttggtgaaactgatcccatggatatgtct
gatggtatgcaagaagcgatgcaccgttctcatttagaaatgagtggtgcagaatatatc
cgcaaagaaattcctcttcatgttcttcccgcgtcatccttacttgagctcgaggcacca
ttgacctcctttacagatttgcagcgtgtgctatatgaagaagagaaggcggcttataac
caatccatatcccagaacatcagggatggcaaggtgcatccgcttactttcattcaccac
acatctacatatcaagcttcaatgtgcaagctaatggagtactgtctggctcctgctata
gaagctctggaagatcggcttcgagaaaatgaatttcggttgggaatgttgactgaagaa
gcaaaagtcctggaggaagcttctaaaggaactgaaggaacaatcggatctcctcatcgg
tttgacagatatcgaggaagtcctgctcgtgcacctactgaatctatcaatacaagaagt
cctctaccagctagtcctagtagcaaaagccgaaaaggattctga
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