Amaranthus tricolor (tampala): 130820222
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Entry
130820222 CDS
T09367
Name
(RefSeq) chloride channel protein CLC-f isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atri02000
]
130820222
Transporters [BR:
atri02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
130820222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
130820222
NCBI-ProteinID:
XP_057541486
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Position
8:7532346..7554281
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AA seq
813 aa
AA seq
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MMDDERREGERMENNQDDVALMRSTDDDSSLEEEGGGRGTFNNLISQLKSKSKSKSKSKS
NSKSPTVSLDRGWNQIGVGDEEDPPASTSASASESSSSPSFGFSRHHHHHHHHSDLDSET
GGEALGDPPEWALLLIGCLLGLATGLCVAAFNRGVHVIHEWAWAGTPNEGASWLRLQRLA
DTWHRILLIPVTGGVVVGMMHGLLEILDQIKPPAPPSKTKSKSGFHLLAGVFPTIKAIQA
AVTLGTGCSLGPEGPSVDIGKSCAYGCYLFMENNRERKIALVAAGAAAGIASGFNAAVAG
CFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNELLGNNSAFTVPSYDLKSAAELP
LYLILGMLCGVVSVFFTRLVVWYTKLFDFIKEKFGFPAVVCPALGGLGVGIIALKYPGIL
YWGFTNVDEILHTGKIASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVG
AVFGGSASDLINSALPGNTSVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRIL
LPLMGAVGLAIWVPSVANQGNETEPAELRNRTRGYSSVSSRENAVDSSSGGREHVELSVV
KDANVLRSFDALILDDLKVSHAMSVNYFSVVLDTTVRDAMKYMHQNQQNCVLVVDSNNLL
EGILTRGDIKRYLSKKSAKVISNKSIPYDVYACPVYMACTRGISYRGLERGVLTCFPDTD
LVTAKDLMEAKGIKQLPVVMRGGNSQEERRRRIMAVLHYDAMSNYLRIFWSHLCIGVIRT
ESCALFGICRSLKEVGNQTSHLPGQMLANDNGH
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgatgaaagaagggaaggagaaagaatggaaaacaatcaggatgatgttgca
ctgatgagatcgactgatgatgattccagtttggaagaagagggcggaggaagaggaact
tttaacaatctcatctcacaattaaaatcaaaatcaaaatcaaaatcaaaatcaaaatca
aattcaaaatcgcctacagtaagtctagatcgtggttggaatcaaattggggttggggat
gaagaagatccccctgcttctacttctgcttctgcttctgaatcttcatcttccccatct
tttggttttagtcgtcatcatcaccatcatcatcatcattctgacctcgattcagaaact
ggcggagaagctcttggtgatcctccagaatgggctttgctcctcattggctgccttctt
ggtctcgctacaggtctttgtgttgccgcttttaaccgaggggtgcatgtcattcatgaa
tgggcttgggctggtactcctaatgaaggcgcttcttggcttcggttacagagacttgca
gatacttggcatcgcatacttctcataccagttacaggtggtgttgttgtaggaatgatg
catggtttgcttgaaattttagaccagattaagccccctgctcccccttctaagactaag
tcaaagtcaggttttcatctccttgccggagtctttcccacaattaaagccattcaagct
gctgtcactctaggtaccggttgttccttgggtcctgagggtcctagtgttgatattgga
aagtcttgtgcctacggatgctacttgttcatggaaaataacagagaaagaaagattgct
cttgttgctgctggagctgctgctggtattgcttcaggttttaatgcagcggttgctggt
tgtttctttgctattgagacggtgttaagacctcttcgtgctgagaattcaccaccattt
actacggcgatgataattttagcttctgttatttcgtcaactgtgtcaaatgaattgctt
ggaaataattcagcttttacagtgccatcatatgatttgaaatcagctgcagaattacca
ttatacttgattttgggtatgctatgtggtgttgttagtgtatttttcacgcgtttagta
gtttggtataccaagctctttgatttcatcaaagaaaaatttggctttcccgctgttgtt
tgtcctgcattaggaggtttgggggttggcataatagctctcaagtatcctggaattctg
tattggggcttcacaaatgttgatgaaattcttcatactgggaaaattgcttcagcacct
ggaatatggttgttggctcaattagctgcagcaaaggttgtagctacagctttgtgtaaa
ggatctgggcttgtaggtggcctttatgctccaagcttaatgataggtgctgcagttggt
gctgtttttggaggttcagcatcagatttaattaattcagctttacctggaaacacctct
gttgcccaacctcaagcctacgcactggttggaatggctgctactttagcttctgtttgt
tctgtacccttgacatctgttttacttcttttcgagctgactaaagattacagaatattg
cttccgctcatgggagctgttggtttggcaatatgggtaccctctgttgcaaatcaagga
aacgagacagaaccagctgaattgaggaatcgcacacgaggttattcttctgtttcttct
cgtgagaatgctgtggacagcagcagtggaggtagagagcatgtagagctctctgtcgtg
aaagatgctaatgttctcagatcatttgatgcactaattcttgatgatctgaaggtctcc
catgctatgtcagtgaactatttttctgttgttctggatacaaccgtgagagacgctatg
aaatatatgcatcaaaaccagcagaattgtgttcttgtggttgacagtaataatctactg
gagggtatcttgacaaggggtgatattaaacggtatttgtccaagaaatctgccaaggtt
atcagcaacaaatcaataccttacgatgtatatgcatgtcctgtttacatggcgtgtact
cgtgggatcagctaccgtggcttagagcgtggtgttttgacttgcttcccagacactgac
ttagtgacagccaaggatctaatggaagctaagggtattaaacagctacctgtggtgatg
cgaggtggaaattcccaggaagaaagaaggcgaagaattatggctgtccttcactatgac
gctatgtcaaactatctcaggatattctggtcacacctctgtattggagtcatccgcact
gaatcttgtgctttatttggcatctgcagatccctaaaagaggttggaaatcaaacatca
catcttcctggtcaaatgcttgccaatgacaatggccactga
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