Amaranthus tricolor (tampala): 130820394
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Entry
130820394 CDS
T09367
Name
(RefSeq) nuclear pore complex protein NUP58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130820394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130820394
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130820394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF445
Med3
F1F0-ATPsyn_F
Motif
Other DBs
NCBI-GeneID:
130820394
NCBI-ProteinID:
XP_057541728
LinkDB
All DBs
Position
8:complement(19090070..19097276)
Genome browser
AA seq
495 aa
AA seq
DB search
MSSFNLFSTPQQQQQQSPFSFQTQSQPQSNPFLQQTQQQQQQLQFQQQQQQQQQLQQQQQ
QQLFLFTNEKTPASYSTKWSDLHPDSQKVLLQIEERVLEYRDESQRLDQCSRLFDSSVAN
NTFELDASRILQELGGISTSVERQKATLQELMAVVKEMLRNAEIAIRSFMMLRPRFLHQK
SGTASNLTAQSQTPGATTGPGSAGQAAANSMVAVIDFYSGIPKKPSPFMQQTVSRFEKYL
GECRQWIEELEQLLLSDFDRNSINFNSSVLQSLPKVLSNVHEFFVHVAAKVESIHQYIES
MRTAYLNDQRRRGDAGDPFLEADRREIARQEAAAKRVHPTLHLPAAPQPTTQVAGLFASS
ATPGVASIAPTSGAPTSSSTGMGFPNLLATSANTSSSSLFSTPSSSSLFSTPSSVAGSSL
FTAPTASQSSPFSSSTPSLFASASTPSLFGGSTPASTPAGGSLFSTPFGSGAALGSGSSF
NATNRARPRSRTSRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttcaatctgttctctactccccaacaacaacaacaacaatctccattttca
ttccaaactcaatctcaaccacaatcgaatccattcttgcaacaaactcaacaacaacaa
caacaattacagtttcaacaacagcagcaacaacagcaacaattgcaacaacaacagcaa
caacaattgtttctgtttacaaacgagaaaactccagcaagttacagcactaaatggtca
gatctacatcctgattcccagaaagtacttttgcaaattgaggagagagtactggagtat
agagatgagagtcagagattagatcaatgtagccgtctgtttgattcttctgttgcaaat
aatacttttgagctcgatgctagccgtattcttcaggagctcggcggaatcagtacatct
gtggaaagacaaaaagcaactctgcaggagttgatggctgttgtaaaggaaatgttaagg
aatgcggagattgccattcgttcttttatgatgcttagacctagatttcttcatcaaaag
tctgggactgcttcaaatcttaccgctcaatctcaaacaccaggtgcaacaacaggtcct
ggtagcgcgggtcaagctgctgccaactctatggtggcagttattgatttctacagtggg
attccaaaaaaaccatctccatttatgcagcaaacagtttccagatttgagaagtacctt
ggggaatgccgccaatggattgaagaattagaacagcttctgctctctgattttgatcgg
aattccattaatttcaactcatcggttttgcagtctcttcctaaagttctgtctaatgta
catgagttttttgtgcacgtggctgctaaggtggaaagcattcatcagtatattgaatcc
atgagaacagcatacctgaatgaccagcgacgtcgtggggatgccggtgatccattttta
gaggcggaccggcgtgaaatagccagacaagaagcggctgcaaaaagagtacacccaact
ttgcatttaccagctgcacctcaacctacaactcaggttgctgggttgtttgctagctca
gcgactcctggggtagctagtatcgcacctacttctggagcaccaacttcatcttcaact
ggaatggggtttccaaatctcttagctacttctgcaaatacttcctcgtcatctctgttt
tcgactccttcctcgtcatccttgttttcaaccccttcctcggttgcaggatctagtctt
tttactgcacctaccgcttcccagtcatcccctttttcttcttcgactccatcattgttt
gcttcagcttcaacaccctcgttgtttggtggtagtacgccagcttctacgcctgctggg
ggctctctcttctcgacaccttttggttcaggtgctgcattaggatcaggttcaagcttt
aatgctactaacagagctaggccaaggtctcgcacaagtcggcgatag
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