Amaranthus tricolor (tampala): 130820414
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Entry
130820414 CDS
T09367
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130820414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130820414
Spliceosome [BR:
atri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130820414
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Mbeg1-like
Motif
Other DBs
NCBI-GeneID:
130820414
NCBI-ProteinID:
XP_057541758
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All DBs
Position
8:28584392..28590847
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AA seq
488 aa
AA seq
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MATLADSFLADLDELSDNEDVAVEENVDASNMEEDIDGELADLESLNYDDLDNVSKLQKS
QRYNDIMQKVEDALQKGSVVPDHGIVLEDDPEYQLIVDCNVLSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
PEEVLQKTVEACDRAIKLDSARKKVLDFVESRMLYIAPNLSAIVGSAVAAKLMGTAGGLA
ALAKIPACNVQLLGVNRKNFAGFSTATSQFRVGYLEQTEVFQTTPPPLRMRACRLLAAKS
TLAARVDSTRGDSTGKTGRTLREEIRKKIEKWQEPPPPKIPKPLPVPDTEPKKKRGGRRL
RKAKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRMSAGPSKLAVK
VSKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSK
IKSNLSRV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgcagattcgttcttggccgaccttgacgaattatcagacaatgaagat
gttgcggtggaagaaaacgttgatgcttcaaacatggaggaggatatagatggagagttg
gctgaccttgagtccttaaattacgatgatcttgataatgtttcaaaactgcagaagtca
caacgttacaatgacatcatgcagaaagtagaagatgctttgcaaaaaggctctgttgtt
cctgaccacggaatcgtattggaagacgatccagaatatcagttaattgttgactgtaat
gtattgtctgtcgatatcgaaaatgagattattattatccacaacttcatccgtgacaaa
tatcgtctcaagtttccagagctcgaatctcttgttcatcaccctattgactatgctcgt
gttgtcaaaaaaattggtaatgaaatggacttgacgttagttgatctggaagggcttttg
ccttctgctatcatcatggttgtttctgtcactgcttcaaccaccagtggtaaaccgctc
ccagaggaggttttacagaagactgttgaagcttgcgatcgtgcaattaagcttgattca
gctaggaagaaagtccttgattttgtggaaagcagaatgttgtatattgcaccaaatctt
tcagctattgttggaagtgctgttgcagcaaaacttatgggaactgccggaggtttagct
gctttagcgaaaattccagcttgcaacgttcagcttcttggggtcaataggaagaatttt
gctggattttccactgcaacatctcaatttcgtgtaggatatcttgagcagacagaggta
tttcagactacgcctccccctctgagaatgcgtgcatgtcgtcttttagctgcaaagtca
accttggctgctcgagtagattccacaagaggtgattcgactggaaagactggaagaaca
ttacgtgaagagattcgcaagaagatcgagaagtggcaggagccaccacctcctaagatc
ccaaagcctcttcctgtgcctgatacagaacctaaaaagaaaagaggtggacggaggcta
cgtaaggcgaaggaaagatatgctgtcaccgatatgaggaagttggcaaacaggatgcag
tttggcgtgcctgaagagagttcattaggtgatggattgggagaaggctatggaatgctt
ggtcaagctggtagtggaaagctgcgcatgtctgctggtccaagcaagcttgcagtcaaa
gtttctaagaaattcaaggagaagcgctatggaagcagtggcgctacctccggattaact
tcaagtttagcatttactcctgtccagggcatagaactttcgaatccgcaggctcatgca
catcaacttggcagcggaactcagagtacgtatttctctgaaaccggcacattttcaaaa
atcaagagcaacttgagtagagtttga
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