Amaranthus tricolor (tampala): 130820496
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Entry
130820496 CDS
T09367
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130820496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130820496
Spliceosome [BR:
atri03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
130820496
Complex B
130820496
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
RRM_5
Motif
Other DBs
NCBI-GeneID:
130820496
NCBI-ProteinID:
XP_057541877
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All DBs
Position
8:23921262..23932486
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AA seq
475 aa
AA seq
DB search
MGDFNDSSNNDAFLRNQNAAVQGRTKAQNRANVLQLKMMGQSHPTGLTPNLLKLFEPRPP
LEYKPPLEKRKCPPYMGMAQYVNLFAEPGHPEYALPVKEAETRIQKKARIHQLRLERGAA
KVAEELEKYDPSSNINATEDPYKTLFVSRLSYETSESRLKREFETYGAIKRVKMIYDKET
NKPKGYAFIEYAHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR
VGNEDVNQRLSTRELQSGGPSRSEEPRIREDRDREKSRDRDRERDREREKSHERSHGRTR
DRDHKEDRHHRDRDRTRDKERERERGRDRGLDRTRDRERGKDRARGHDRDKDHGRSHDRH
RDRDRDYDSVEADHDRGHSRDGDYDLDHGEAKHDRGRHGERERGYDHGPTDEDQRYYEAD
LGNKHETEHDDHYGHHRSRGPYDDKAVINDDDRYNHYASESGHMEEDNHNYERDA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttcaatgacagtagtaacaacgatgctttcttgcgaaaccaaaatgctgct
gttcaaggtcgcaccaaagcccagaatcgtgctaatgttcttcagcttaaaatgatggga
cagtctcatccgactggtttgacgccaaacttgttgaagcttttcgagccccgacctcct
ttggaatataagccgccgctggagaagaggaaatgtcctccttatatgggaatggcccaa
tatgtaaatctttttgctgaacctggtcaccctgagtatgccctgcctgttaaagaagct
gaaactaggatacaaaagaaggccagaatacatcaattacgactagagaggggtgctgca
aaggttgcggaagagcttgagaaatatgatccatcaagtaacataaatgcgactgaagac
ccatacaagactttatttgtttcgaggctgagttacgagacctcagagagcaggttgaaa
agggagtttgaaacctatggggccataaagcgggtaaaaatgatctatgacaaggagacg
aacaaaccaaaaggttatgctttcatagaatatgctcatacaagggacatgaaagctgca
tataaacaagctgatggaagaaaaattgacggaagaagggttcttgtagatgtggaacgt
ggaagaactgtcccaaactggcggcctcgtagactgggtggtggattaggaacaactaga
gttggtaatgaagacgtcaatcaaaggctttctacaagggaacttcaatctggaggtcca
tctcgatcggaggagcccagaatacgagaggatagagatagagaaaaatctcgagatagg
gatagagagagagatagggagcgagaaaaatctcatgagcggtcccatggaaggacaaga
gatcgggatcacaaagaggataggcaccacagagaccgtgacagaaccagagataaagag
agggaaagagaacgtggccgcgatcgtggccttgatcgtacacgtgatcgtgaaagaggt
aaggaccgtgcccgtggtcatgatagagataaggatcatggacgttctcatgataggcat
cgagacagggaccgtgactatgattctgttgaggcagaccatgatcgtgggcattcccgt
gatggagattatgatcttgatcacggggaagcaaaacatgatcgtggaagacatggtgaa
agagaacgaggttatgatcatggtcccactgacgaagatcaaaggtattatgaggctgat
cttgggaacaagcatgaaaccgagcatgatgaccattatggacatcaccggagccgagga
ccctatgatgacaaagccgttataaacgatgatgatcgttataatcattatgctagtgag
agtggccatatggaagaagacaaccacaattatgagcgggatgcctga
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