Amaranthus tricolor (tampala): 130820498
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Entry
130820498 CDS
T09367
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00900
Terpenoid backbone biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130820498
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
atri01006
]
130820498
Enzymes [BR:
atri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
130820498
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
130820498
2.5.1.29 geranylgeranyl diphosphate synthase
130820498
Prenyltransferases [BR:
atri01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
130820498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
130820498
NCBI-ProteinID:
XP_057541880
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All DBs
Position
8:complement(23941946..23943558)
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AA seq
381 aa
AA seq
DB search
MACTSCTINLGIWVQTSSIYKANSRSRSSISKIINHGSNTFSLSPLLTRKSPKKLSTISA
ILTRNETAIDPSENKKPQEIPSTVPFDFKLYMVEKAKSVNKALDMAVTLKHPEKIHEAMR
YSLLAGGKRVRPMLCIAACELVGGDEAAAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRG
KPTNHKVFGEDVAVLAGDSLLSFAFEHMATATPLNQVSPGQVVRAVGELARVIGAEGLVA
GQVVDIDSEGAVDVGLEQLEFIHIHKTAKLLEGSVVLGAIIGGGSDEEVERLRKFAIGIG
LLFQVVDDILDVTKSSEELGKTAGKDLVADKVTFPKLMGIEKSREYAEKLVKEAKEQLVG
FDQEKAKPLIALADYIAYRQN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcactagttgtactatcaatctgggaatttgggttcaaacatcttcaatttac
aaggctaattctagatctagatcttccatttcaaagattattaaccatggcagcaatact
ttttctttatcccctttactcacaagaaaatcacctaaaaagttatctacaatttctgca
atccttacaagaaatgaaaccgcaattgacccatctgagaacaaaaaaccccaagaaatc
ccatcaacagtaccgtttgatttcaagttatacatggtggaaaaggcaaaatcggtgaat
aaagctttagatatggcggtaactcttaaacatccggaaaaaatccatgaagctatgaga
tattcattgcttgcaggggggaagagggttaggccaatgctttgtatcgccgcttgcgaa
cttgtaggcggtgatgaagcggctgctatggctgccgcttgtgctgtagagatgatccac
accatgtcattaattcatgatgatctcccttgcatggataacgacgatctccgtagagga
aaacccaccaaccacaaagtgtttggtgaagacgttgctgtcctcgcaggggattcactt
ctgtccttcgctttcgagcacatggctacggccactccattaaaccaggtctcccccggc
caggttgttcgggctgttggagaacttgctcgtgttatcggagcggaagggctcgtagca
ggtcaggtagtcgacatcgattctgaaggtgccgtcgacgtcggactcgagcagcttgag
ttcatccatatccataaaactgccaagcttcttgaagggtcggttgttctgggtgctata
attggtggtgggagtgatgaagaagtggaaaggctcagaaagtttgccattggaattggg
ttattgtttcaggttgtagatgatatattggatgtgacgaaatcatccgaggaattgggg
aaaactgctggaaaggatttagtggcagataaggtaacattccctaaattaatggggatt
gagaaatcaagggagtatgctgagaaattggttaaagaggctaaagaacagcttgttgga
tttgatcaagaaaaggctaaacccttaattgctcttgctgattatattgcttacagacag
aattga
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