Amaranthus tricolor (tampala): 130820501
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Entry
130820501 CDS
T09367
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130820501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130820501
03036 Chromosome and associated proteins [BR:
atri03036
]
130820501
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130820501
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130820501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
130820501
NCBI-ProteinID:
XP_057541883
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All DBs
Position
8:29070268..29086364
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AA seq
1010 aa
AA seq
DB search
MLVPVSPYTVGATIDSEYYTEPSLKDLTEIEGINARDSCKIRDFTVGKIGFGSVRFLGET
NVRGLDVMEIVKFNRHEVVVYEDESCKPPVGEGLNKPAVVTLVLKLGRLDFEGDRLCKIV
DRLRATAEKQGAEFISYDPLSGEWKFLVQHFSRFGLSVDDEDDIVMDDADADPVEDYVEM
NDDVGEDEGIVSDRFDMGNGPDLSHSLPTFLGLDPDRMKEMKMLMFSDDGYDVEDNSGFP
SYEKQVAHREKSPLYNSGLMVNYKPSPPPPRKTPVPLLEYKSKDFDVNSPGALVLSQKNK
GSPVRMVNPVGFKLNSKQETPVSGYHSRNIVDAGLFMGRSFRVGWGPNGLLIHSGVPVGN
DRQGVLSSVITLEKVAIDKITRDETNEVKKEAIDLLFDSPLDLHKSLNRRILEVEVGSFK
LSLQKVVCDRLILSDICRRYIDVVEKQLEVTDMVASVRVSLMHQVIVWELIKVLFSEKET
SGQTEDEVDALEEDMMLDGKVGCSEFDPEALPLMRRAEFSYWLQESVYHRVQEDLSCVSE
SDDLEQLFLLMTGKQLDAAVELAASGGDVRLACLLGEAGGSMVNRSDIAQQLELWRINGM
DMNFIEKDRIRLYELLSGNIHSALAGKRVDWKRFLGLLMWYELPPGTPLPAIFHTYQHLL
TEGKAPYPVPVYIDEGPVDETGKVFTEGRYDLAYYLMLLHASEDGKFDGLKSMFSAFAST
NDPLDYHMIWHQRGILEAIGAFTSSDLHILDMAYVSQLLCLGKCHWAIYVVLHMPYRKDF
PYLHSTVIREILFQYCDTWSSQEDQRKFIEELGVPSQWLLEAMAVYYQYYGDLSKALEHY
IECSSWQKAHSIFITSVVHSLFLSAKDSEIWRLATSMEDYKSEIEDWDLGAGVYISFYLL
RSTLQGDDDINKLDSLESKETACREFFDCLNKSLEVLGSKLPTDARVAYSKMSEEICSLL
VSDSGEDSTHETQLSCFETIATAPIPEDLRSCHLQEALVLFTTYLAETAT
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgttggtacctgtatccccatacacggtgggcgccaccattgattcagaatattatact
gaaccttcattgaaagatttaacagaaatagagggtattaatgctagagacagttgtaaa
attagggattttacggtgggaaagattggattcgggagtgtgaggtttttgggggaaacc
aatgtgagaggtttggatgtgatggagattgttaagtttaataggcatgaagtcgttgtt
tatgaagacgagagttgtaaacctcctgttggggaaggattaaacaagcctgctgttgtg
actttggttttgaagttaggaaggttggattttgaaggtgatagattgtgtaagattgtt
gataggttgagagctactgctgaaaagcaaggagctgagttcatttcttatgatccgttg
agtggagaatggaagtttttggttcaacattttagtcgatttggattaagtgtagacgat
gaggatgacattgtgatggatgacgcggatgcggacccagttgaggattatgttgagatg
aatgatgatgttggtgaggatgagggcattgttagtgatagatttgatatgggcaatggt
cctgatctttctcactcacttcctacttttcttgggcttgatcctgatagaatgaaggag
atgaaaatgttaatgttttctgatgatggctatgacgttgaagataattccgggtttcct
tcttatgagaaacaagtagctcaccgagaaaagtctcctttgtataactcagggctaatg
gttaattataaaccgagtcctcccccacccaggaagactccagtacccttgctcgagtac
aaatctaaagattttgatgtaaattctcctggagctcttgtactttcccagaagaataaa
ggatcacctgtgaggatggttaatccagtaggtttcaagcttaattctaagcaagaaaca
ccagtttctggttaccattcacgcaatatagttgatgcaggattgttcatgggtaggtca
tttcgtgttgggtggggaccaaatggtctccttattcatagtggtgtacctgttggtaac
gatcgccaaggagtgctttcttctgttatcactcttgaaaaggttgcaatagacaaaatc
actcgagatgaaactaatgaagtgaaaaaggaagcaattgatttgctttttgattctccc
ttggatttacataagtctttgaatcgtagaatactagaagttgaagttggttcctttaaa
ttaagccttcaaaaagtcgtatgtgatcgcttaattctgtctgatatatgtcggcgatat
atagatgtagtggagaagcaactagaggttactgatatggtggcatctgttcgtgtgtct
ttgatgcatcaagtcattgtatgggagctaattaaagtccttttctctgaaaaagagact
agtggacagacagaggatgaggtagatgcccttgaggaagatatgatgttggatggaaaa
gtcggttgttcagaatttgaccctgaagcacttcctttaatgcggagggcagagtttagt
tattggttacaagagagtgtttaccaccgtgtgcaagaagatttgagctgcgtgagtgag
tctgatgatctggagcaattatttcttttaatgactgggaaacaattggatgctgctgtt
gaattggctgcttctggaggggatgttaggctggcctgcttactaggagaggctggtggg
tctatggtgaaccgttctgatatagctcagcagttagaactgtggagaattaatggaatg
gacatgaatttcattgaaaaggacaggataaggctttatgaattactttcaggtaacatt
cacagtgctttggctggaaaaagggttgattggaaaaggttcttggggttgttgatgtgg
tatgaattgccaccaggcactcctttgcccgctatttttcacacatatcaacatcttctt
actgaaggcaaggctccttacccggttccagtttatattgatgagggaccagtggacgaa
actggtaaagtttttacagagggacggtacgaccttgcatattatctaatgttgcttcat
gctagtgaagatggtaaatttgatggcttgaaatccatgttcagtgcttttgcgtcaact
aatgatccacttgactaccatatgatttggcatcagcgtggaattcttgaagcaataggt
gcctttacttctagtgatcttcatattcttgacatggcatatgtttcccagcttttgtgt
cttggaaaatgtcattgggctatttatgttgttcttcacatgccctaccgtaaagatttt
ccttacttacattccactgttattcgagaaatcttgttccaatattgtgatacttggagt
tctcaagaagatcagcgcaaatttattgaagagttgggtgttccttcacagtggttgctt
gaggctatggctgtgtactatcagtactatggtgatctttcaaaggccctagaacattac
attgaatgttccagttggcaaaaagctcattcaattttcataacatcagttgttcattcc
ttatttttgtcagcaaaagactcggagatatggaggctggcaacttcaatggaggattac
aagtctgagattgaagactgggacttgggagctggagtttatatttcattttatttgttg
agaagcactttacagggagacgacgatataaacaaactggattctctagagagtaaagaa
actgcttgcagggaattttttgactgcctgaacaagtctctggaagtcctgggaagcaaa
ctaccgacagatgcaagggtggcctattcaaagatgtcagaagagatctgcagtttgctt
gtgtctgatagtggagaagattcaacccatgagactcagttgagctgctttgaaaccata
gctacagccccgattcctgaagatctccgctcttgccacttacaggaggcactggtactt
ttcaccacttatcttgctgagacggctacctga
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