Amaranthus tricolor (tampala): 130820734
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Entry
130820734 CDS
T09367
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130820734
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130820734
04121 Ubiquitin system [BR:
atri04121
]
130820734
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130820734
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130820734
Membrane trafficking [BR:
atri04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
130820734
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130820734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130820734
NCBI-ProteinID:
XP_057542212
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All DBs
Position
8:19383316..19403275
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AA seq
557 aa
AA seq
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MKIMVRWNSMKIKRDINISLLLQKMRSGFQMLAHIDWVSAYGSHLSAATVLGVVGLLLAV
RDGRMGKFNNLLLLSARNNGSEKLFFVPGLRNLGNNCFLNVVLQSLASCSSFRCFLEDVK
SLQTSYRVEQDEDFPLLVSLADLLEELSLLQDKSRALNPLKVMTAMQQYIPQFQLSNEQD
AAEGFLHLLSCLRDELSESYVPNYGSLSELSAPTSRILSREKMEDLKEPKRWRQQYLGPF
DGILGSFLTCQSCSSEIIMDFSFFHTLPLSLISCSGAYILDRSTLEDYIQRFLAPEYVEN
YSCSHCWHIAAVKYLSSVGGLQDEIEKLSCCGEQDSCDCKNISSVQTLPWSNRFSRASKK
FNIAYCPKILCFHLQRSSYNAFGELVKIQGHIKFPMILNLSAFIKSEVSILEREVNKPSV
KEQPYLAATFRFKSEDKHIDPFVDASQLSLEPCLSLTATDSYAKLMHSLKVTSDPPPPET
ISYRLVSVVEHFGRAGSGHYTVYRGVRNEPGGVDDNVGGIDTDTHLEWFRISDSEVHKAS
EVDVLGAEATLLFYERI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatggttcgttggaatagtatgaagattaaaagagacatcaatatttcatta
ttgttgcaaaaaatgagaagtgggtttcaaatgttggcacatattgattgggtttcagct
tatgggtctcatttatcagctgctactgttttgggtgtggttggcttgctgctggccgtt
agagatggtagaatgggtaaattcaataatttgctattgctttctgctagaaataacggt
tctgagaagctattttttgtacccggcttacggaatttgggcaacaattgtttccttaat
gtagttttgcagtcgcttgctagttgttcgagttttaggtgttttttggaagatgttaag
agtttgcagacatcttatagggtagagcaggatgaagattttccccttttggtatctttg
gctgatttactagaagaattaagcttgcttcaggataaaagtagagcattaaacccacta
aaagtaatgactgccatgcagcaatatatcccacaatttcaattgtcaaatgaacaggat
gcagcagaaggatttcttcatcttctctcttgtttaagagatgaattatcagagtcttat
gtgccaaactatggttccttatcagaattatctgctcctactagtcgaatactttctcga
gagaagatggaggatctaaaggagccaaaaagatggcggcaacaatatcttggccctttt
gatgggatacttggcagtttccttacctgccaaagctgttcttccgagattataatggat
tttagtttcttccacacattgcctctttctctaatttcctgctctggtgcttacatactg
gatagatctacacttgaggattacattcagaggttcttggctccagaatatgttgaaaac
tattcttgcagtcactgctggcatattgctgctgttaaatatttatcttctgttggagga
ctgcaggatgagattgaaaaattgagttgttgtggagagcaggactcttgtgactgcaag
aatatatcatcggtgcagacccttccttggtcaaatcgcttttcacgtgcttctaaaaaa
ttcaatattgcttactgtccaaagattctttgctttcatctccagcgcagttcatataat
gcatttggtgagcttgtgaaaattcagggccatatcaaatttccaatgatcctgaatcta
tcagcctttattaagtctgaggtcagcattctagagcgagaagtaaataagcctagtgtg
aaggagcagccttatctggcagccacctttcgttttaaaagtgaagacaagcatattgat
ccatttgtagatgcatcacaactttctctggaaccttgtttgtctctgactgcaaccgac
tcctatgccaaacttatgcatagtcttaaggttacttcggatccaccacctcccgaaact
atatcatatcgtctggtttctgttgtggagcacttcggacgagctgggagtggacactac
acagtatatagaggagtcagaaatgaacccggaggagttgacgacaatgttggaggaatc
gatactgatacgcatttggaatggttccgcatatcagattcagaggtgcacaaagcttct
gaagtggatgttcttggtgcagaagctactctgcttttttacgagagaatctga
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