Amaranthus tricolor (tampala): 130820770
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Entry
130820770 CDS
T09367
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130820770
Enzymes [BR:
atri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130820770
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130820770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130820770
NCBI-ProteinID:
XP_057542261
LinkDB
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Position
8:29172901..29173583
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AA seq
150 aa
AA seq
DB search
MGLSNFPSPSEGVLPVLVMNTVMSVSILKNLLGSFLQMMRGLNWVSSNNLEENPTQNELN
PPNSPYRIRRVKGISITQFKYLCTNTCNKKESSNGKRRIIVECCVCLCKFEDEEEVSELS
CKHFFHKNCLDKWFNHHSTCPLCRSICRKR
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtcaaattttccaagtccatcagaaggtgtattaccagtgttagtgatgaac
acagtaatgtcagtatcaattttgaagaacttattagggtcatttcttcaaatgatgaga
ggcttgaattgggtttctagtaataatttagaggaaaatccaacacaaaatgaattaaac
ccaccaaacagtccctatagaataaggagagtaaagggtatttcaattacccaattcaag
tatttgtgtactaatacctgcaacaagaaggaaagttccaatggaaaaagaagaataata
gttgagtgttgtgtttgtttgtgtaaatttgaggatgaagaagaggttagtgaattgtct
tgtaagcatttctttcataagaattgcttagataagtggtttaatcatcatagtacttgt
cctctttgtagatctatttgccgaaaaagataa
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