Amaranthus tricolor (tampala): 130820785
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Entry
130820785 CDS
T09367
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03440
Homologous recombination
atri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130820785
03460 Fanconi anemia pathway
130820785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130820785
03036 Chromosome and associated proteins [BR:
atri03036
]
130820785
03400 DNA repair and recombination proteins [BR:
atri03400
]
130820785
Ubiquitin system [BR:
atri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130820785
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130820785
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130820785
FA (Fanconi anemia) pathway
Downstream FA components
130820785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
130820785
NCBI-ProteinID:
XP_057542281
LinkDB
All DBs
Position
8:complement(5082642..5089978)
Genome browser
AA seq
1101 aa
AA seq
DB search
MNNSLQRRRMVSTWQLFSNAGDDLRWKISPSPAPSHHLNQLHCSPPPNFPSFHDVLLQGS
SKILGDCEEHNAEVFETPMVRTGQGSTVVLKKSSIAKASSVLGDDVFADFDTGKPSCKGK
DFSSPNSMFQTGSGKRLNISPAGLLRAKTLLGVHEINNDCSFQSIQPPKKKLCRVRTASL
EKGTEINTFCSKLPFNLKNNSSEIDSVDKDIGKLIRPVFSGGTTKPTSIKFQTAGGRFIS
VSKDALQQARNLLGDPEMDSLPNESGDDAFMFSFISHSNTDGSAFTKDNNNDSSHQRKQN
SKIFVSPMKPSSHKKQEVKSDSLLSGTNLMRKFDAEAIINNSNDKPSISYLTNTMQGKLD
VFDATPQKSLSNGPGPCSHFSKSSKPSGLPLAEITNTATSDSITKKGTKVLKRHGRSYVS
PFKRPRSSKFITSMNYSKFSVPNELSGMEHEAPCPRNKVSTRFPFRHSRLYVKEYFKEPP
IHTKELEHLPAQVRQLNPQNSERYSFCDGSQIVGVENFYHMLVQSEASMQYASKEWVANH
YKWIVWKLASYERCYSAKVLKKFLTVLNVLEELKYRYEREVNHGQCSAIKRILEGDALPS
STLVLCVSEVQSALPSLEGKTSISTLELTDGWYSICAQLDHLLSKQLAGGKIFVGQKLRI
CGAGLNGWDGPVSPLKAFPTVSLVLHMNGTYRARWDERLGFCRGVCTPLAFRCIKDDGGV
VPCTIVGITRIYPVLYKERLRSGASVVRSERWEASCAQLHNQRCSDIIEGITSDFQRGSI
GSCIENDYDDEGAKILKMLESVAEPELLMADMSPEQLTSFSKYQAKVEEKRQENLQRLIV
KALEDEGLNARNVTQFMRVRVVGLQSKGQCKGEVLRNGLITIWNPTEWQRLELVEGEAYA
ISGLTPLHSDSNTLYLQNRGWNNKWKKLTRKDRELFGPFFDPPKPVLLSKIGEVSSDFDT
AVLVLHVGLEFLSGQHKKQWVFVTDGSVYKLQTEESTVSLMAIIFSTQCTDDCISPINSN
LVGSIVGFRNLTKRDKDHGNHMWVAEATENSTYYLNCDHPSCSHLKDSFYRVKRWEQRAS
LTIEKLKKKVLDIIGGPAPEG
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattctcttcaacgacgccggatggtgtcaacttggcaattattttccaatgca
ggagacgatctccggtggaaaatctctccttctccggcaccttctcatcaccttaatcaa
ctccactgctctcctcctcctaatttcccttcgttccacgatgttttacttcaaggaagt
tcaaagattcttggagattgcgaggagcataatgctgaagtgtttgagactccaatggtt
cgaactggacaaggaagcactgttgttttgaagaaatcgtctattgctaaagcatcttct
gttctcggtgatgatgttttcgccgattttgatactgggaaaccaagttgtaaaggaaaa
gatttcagttctccgaattccatgtttcaaacgggttcagggaagagattaaacatatcc
ccagctggacttcttagagctaaaactttattgggtgtacatgaaattaacaatgattgc
tccttccaaagcattcagcctccaaagaagaaattatgtcgagttcgcaccgcatcactt
gaaaaagggactgagattaatacattttgctcaaaattgccttttaatttgaagaataat
tcatcagaaattgattctgttgataaggatattggtaaacttatacgaccagttttctct
ggtggcaccacgaaaccaacttcaatcaagttccaaactgctggtggcaggtttatatcc
gtttctaaagatgctttacagcaggccagaaaccttcttggtgatccagaaatggacagt
cttccaaatgagagtggtgatgatgcttttatgttctcatttatcagtcatagtaatact
gatgggagcgcctttaccaaggacaacaacaatgattcttctcatcaacgtaaacaaaac
tcgaagatctttgtatcacctatgaagccatcttctcacaaaaaacaagaagtaaaatct
gatagtttactctcaggaaccaatttaatgaggaaatttgatgccgaggcaatcattaat
aactcaaatgacaaaccatctatatcctatctgacgaacacaatgcaaggaaagcttgat
gtttttgatgccacacctcaaaagtctttgtctaatggtcctggtccatgttcacatttt
tccaaatcttcaaaaccatctggtttgccacttgctgaaattacaaataccgcaacaagt
gactctatcactaagaaaggaaccaaagttctaaagagacatggaagaagttatgtttcc
ccttttaaaaggccaaggagttccaagttcattacatctatgaactacagcaagttctca
gttcccaatgaattgtctggtatggaacatgaagctccatgtccccgaaataaggtttct
acccgttttccatttaggcattcaagattatatgtcaaagagtattttaaagagccaccg
atccatacaaaagagttggagcatcttcctgcacaagtgcgtcaattaaatcctcagaat
tcagagagatactcattttgtgatggatctcagatagttggtgttgaaaatttctaccat
atgctggttcagagtgaagcttccatgcaatatgcatccaaggagtgggttgcaaatcac
tacaagtggattgtgtggaaacttgcaagctatgagagatgttattcagctaaagttttg
aagaagtttctaactgttttgaatgttcttgaggagttgaaatatagatatgaacgtgag
gttaatcatggtcagtgttctgcaatcaagagaatcctagaaggagatgcattgccttct
tccacactggtgctatgcgtttcagaggttcaaagtgcacttccaagtttggaaggaaag
actagcatttccacattagagcttactgatgggtggtactcaatatgtgcccagttggat
cacttgctttcaaagcagcttgcaggtggaaaaatatttgtgggtcaaaaactacggata
tgtggagccgggttaaatggttgggatggacctgtttctcctctcaaggcatttccaaca
gttagtttagtgctacatatgaacggaacttacagagctcgttgggacgaacgtttggga
ttctgcagaggtgtatgtacacctctggcatttaggtgtatcaaggatgatggaggtgta
gtcccatgtactatagtcggtattactaggatttatcctgttctatataaagaaaggttg
aggagtggagcatctgttgtgaggtctgaaaggtgggaggcttcttgtgcccaactgcat
aatcaaaggtgctctgacatcatagaaggaattacatcagactttcagagaggttcaatc
ggttcttgtatcgagaatgactatgatgatgaaggggcaaagatcctaaagatgctggag
agtgttgctgaaccagaactattgatggcagatatgagccccgagcaacttacatcattc
tctaaatatcaagctaaagttgaggaaaaaaggcaagaaaacttgcaacgattgattgtg
aaagcccttgaagatgaaggcttaaatgcaaggaatgtaactcagtttatgcgagtgaga
gttgttggactacaaagtaaaggacaatgcaaaggggaagtcctaagaaatggtttgatt
acgatttggaatcctaccgaatggcagaggcttgagctggtagagggggaggcttatgct
atttcaggcctcacaccattacattctgattctaatacactctatctacaaaatagagga
tggaacaacaaatggaagaaattgactaggaaagacagagaactatttgggcccttcttt
gatcctcccaagccggtattgttatctaaaataggtgaagtttccagtgactttgatact
gcggtgttggttttacacgtgggtttagagttcttatctggtcagcacaagaaacaatgg
gtgtttgttactgatggatctgtgtacaagttacaaacagaagaatcgactgtctcattg
atggccattatcttttctacccaatgcacagatgattgtatttctccaattaattctaac
cttgttgggagcatagttggctttcgcaatctcacgaagagagacaaggatcatgggaat
catatgtgggtagcagaagctacagaaaattcaacatattaccttaattgtgaccatcct
tcttgctcacatcttaaagattcattttatcgtgtcaagagatgggagcagcgtgctagc
ttgacaattgagaagcttaagaagaaggtattggatataattggtggtcctgctcctgaa
gggtga
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