Amaranthus tricolor (tampala): 130820852
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Entry
130820852 CDS
T09367
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130820852
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130820852
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130820852
NCBI-ProteinID:
XP_057542376
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Position
8:30658497..30661173
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AA seq
448 aa
AA seq
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MEKQLNLFLLLCSLGFFFVLTWAQNFNNEEESHRYWKLREQEAKKRIGEAYHPYPYNVTN
HLNLRAHLLQRKWEKNEATKVGTNNTRRGLAKVYRRSCMYTNPIDQCWRCQPNWEKKRRV
LAKCALGFGKGTIGGKLGRKYLVTDSSDDDMVNPKRGTLRHAVIQKIPLWIVFAKPMTIR
LNQELIMTSNKTLDGRGTFVSIEGGAGITIQFVENIIIHGIRFRNIVSGTGGMIRDSVDH
YGFRTPSDGDAISIFGSHHIWIDHCSFSKASDGIIDIIKGSTAITISNCHITDHKRVFLF
GANDEHQEDRQMQVTLAYNHFGKGLEQRMPRCRWGFFHIVNNDYTHWLMYAIGGSMNPTI
ISEGNRFIAPPNPRAKEVTHRQKPQSKWDTGIWVSNKDMLVNGATFQQSFPTYIALDKTR
MIYPMPGTFAGRAVKFAGPLKCTSYYKC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaactaaatttgtttctcttattatgttctttaggatttttcttcgtctta
acttgggcacaaaatttcaacaatgaagaagaatctcataggtattggaaattacgtgaa
caagaagccaagaagagaattggggaagcttaccacccttatccttacaacgtcaccaac
caccttaatctccgagctcatttgttacaaagaaagtgggaaaagaatgaagcaactaaa
gtaggaacaaacaacacaagaaggggattagcaaaggtatacaggagaagctgcatgtat
acaaatccgatcgatcaatgttggagatgccaacctaattgggaaaagaaaaggagggtt
ctagccaaatgtgcattagggttcggtaaaggaaccatcggaggtaagctagggcgcaag
tatttggtaaccgactcctcagatgatgatatggttaaccctaaacgtggaactctacgt
catgcagtcatacaaaaaatacctctatggatcgtgtttgctaaacctatgacaattagg
ctcaatcaagaactaataatgacgagcaataaaactctggatggtcgaggaacatttgtt
agtatcgaaggcggagcaggtatcactatccaatttgtagaaaatatcattatccatggg
attaggtttcgaaacatagtctccggaacaggaggaatgatcagagattcagttgatcat
tatggtttcaggactccaagtgacggagatgcaatctctatattcggatctcatcatatt
tggatagatcattgctcattctcgaaagcctcagatgggatcatcgacatcattaaagga
tctactgccattacaatttccaactgccatataactgatcacaaaagggtattcctattt
ggtgccaatgatgagcaccaagaagatagacaaatgcaagttacacttgcatataatcat
tttgggaaaggattagaacaaaggatgccaagatgtagatggggatttttccacatagtt
aacaatgattacacccattggttaatgtatgcaattggcggtagcatgaaccctacaatt
attagcgagggaaatcggttcattgctcctccaaatccaagggccaaggaagttacacat
agacaaaagccccaatctaaatgggacaccggaatatgggtttcaaacaaggacatgctt
gtaaatggtgctactttccaacaatctttccctacttatattgccctagataaaactagg
atgatatatccaatgcccgggacattcgccggccgggctgtcaaattcgccggaccatta
aaatgcacttcttattataaatgctaa
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