Amaranthus tricolor (tampala): 130820959
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Entry
130820959 CDS
T09367
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130820959
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130820959
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Pre-60S particles
Helicases
130820959
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130820959
NCBI-ProteinID:
XP_057542509
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All DBs
Position
8:15944717..15953962
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AA seq
581 aa
AA seq
DB search
MADSSAKTQKEKIELDEDCKTFEELSLDPRLLRALNKKGIVKPTPIQQVAIPLILEGKDV
VARAKTGSGKTFAYLLPLLQKLYTDSGSNTRLAPSSFVLVPTRELCQQVYSDVMSIIELC
KSQLKVAQLTSSMSAPQMKQALAGPPDILVSTPACVHTCLSTGALQPNAIQDSLSMLVLD
EADLLLSYGYEDDLRALTSHVPKRCQCLLMSATSSADVEKLKKLLLHNPYILTLPEVGGS
KDEIIPKNVQQFSISCSAQDKFIYILALLKLELVQKKVLIFTNSIDMGFRLKLFLEKFGI
KSAVLNAELPQNSRLHMLEEFNAGIFDYLIATDDGQANVKDQDGGEKDTEGRKSKKRRKP
KLDAEFGVVRGIDFKNVHTVLNFEMPSSAAGYVHRIGRTGRAFNTGASVSLVSSDEMEAF
EELKSTLAEKESGQTNFVVPFPLLSKNAVESLRYRAEDVLRSVTSFAVRESRAQDLRNEM
LNSEKLKAHFEANPRDLDLLKHDKVLSKKEASAHLRDVPEYLLDPTTQEASKIVKLARAA
MGQRKTGNHPGPKRNSKRKRDPLKTLSAEGPKKHNRTKRNR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcatcagccaaaactcaaaaagaaaaaattgaattagacgaagattgcaaa
accttcgaagaactaagtctcgatcctcgtcttcttcgagccttaaacaaaaaaggtatt
gtaaaacctactcctattcagcaagtcgccattcccttaattctcgaaggaaaagatgtg
gttgctagagcaaaaactgggtcagggaaaacatttgcgtatcttcttcccttgcttcag
aaattgtatacagattcaggttccaatacacgactcgctccttcttcattcgtccttgtt
cctacgcgggaattgtgtcagcaggtttattcagatgtaatgtcaattatagagttgtgt
aaatctcagttgaaagtggctcagctaaccagttcaatgtccgctccacaaatgaagcaa
gcgttagctggacctccggatattttagtatcaacaccggcttgtgtgcatacttgcttg
tctactggtgctcttcaaccaaacgctattcaggactcactttctatgcttgtgcttgac
gaggcagatttgcttttgtcatatggctatgaagatgacctaagagctcttacaagtcat
gtcccaaaacgttgtcagtgcctcttgatgtctgctacgtcaagtgctgatgttgagaag
ttaaagaagcttttactgcacaatccctatattttgactttgccagaggttggtggtagc
aaggatgagataattccaaaaaatgtgcaacaattttcgatttcttgcagtgctcaagac
aaattcatttacatccttgcgcttttaaagttggagctggttcagaagaaagtgctcatc
tttactaattcaatcgacatgggatttaggttaaaactatttttggagaagtttggtatc
aaatcagcagttcttaatgcagagttgccgcagaattcaagacttcatatgcttgaggaa
ttcaatgcgggaatttttgattacttaatagcaaccgatgatggtcaagcaaatgtaaag
gatcaagatggtggggagaaagatacagaggggagaaaatccaaaaaacgcaggaaaccg
aaattggatgctgaatttggtgtagtccgaggaatcgacttcaaaaatgttcatacagtc
ttaaatttcgagatgccttcaagtgctgctggatatgtccatcggattggacggacggga
agagcttttaatactggagcatctgtttctcttgtatcttccgatgagatggaagctttt
gaagaactaaagtctacattagccgagaaagaaagcggtcaaacaaatttcgttgttcca
tttcctttactctcgaagaatgcagtggaatctttgagatatcgagcagaggacgtgtta
aggagtgtgacaagttttgctgtacgagaatctcgggcacaggatttaagaaatgaaatg
cttaactctgaaaagttgaaggcccattttgaagctaatcctagagacttagatcttttg
aagcatgataaagtcctcagcaagaaagaagcttctgcgcatctgcgtgatgtccctgaa
tatttattggacccaaccactcaagaagcaagtaagattgttaaacttgctcgagccgca
atgggtcagaggaagactggtaatcatcctggtccaaagagaaactctaagaggaagaga
gaccccctgaagacattatcagctgagggaccaaagaaacataacaggacgaagaggaat
agatag
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