Amaranthus tricolor (tampala): 130821291
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Entry
130821291 CDS
T09367
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130821291
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130821291
Surveillance factors
Other surveillance factors
130821291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
130821291
NCBI-ProteinID:
XP_057542967
LinkDB
All DBs
Position
8:complement(30138476..30147469)
Genome browser
AA seq
1522 aa
AA seq
DB search
MSARKIDLPHDLHLSTTKASLENGDEKVTLRFLDEVKDQAASENSIPLSPQWLHAKPGDA
KPDARGMNTLSLGNPNDQIQKENDKKDWRKLASENESTRRWREEERETGLLGRRDGRKTD
RRVENVSIRESTDARSLPSSDRWHDSTNRNSVHEARRDSKWSSRWGPEEKEKESRLERRT
YVEKEDAHIDGQSSGSGSRDTELRDKWRPRHRTEPTSGAPTSHRAAPGFGVDKGKLDVRN
FGFTVGRGRSSGGSIVKPPLGSTSATVLVDKNECILGKPNLSVEPFRYSRAKILDIYRLQ
KLDATSFCKPDLMEEVPLLTRVEAVEPLAFIAPDAEEEVILNDVWKGSITGSGASYSPFK
QGKLAEAATGTGDMDSLEENQSVFPANIVEDTVDERPAEYDAATKLSVTESEGPMSGVPT
IADADADVDADDDNYNLRAAENDHAAFDISIKLPDDSNSLFVSESLDDSRCNNLSQCVRD
ANSVGDGVSPEGLSLYYLDPQGEIQGPFLGVDIISWFEQGFFGADLPVRLADASENAPFH
ELGDVMPHLVVQDGLGINSDIGSKMDNLGGSARSSEINDLSTLNCQSWQLPELDNHLNQP
AHSRILEHDISSQHAFSDGKGFYNSSAQEEEIVFPGRPGSGDNHVRGLRSADGPIANIAG
YHNFPNETRKTCMPIQKDDKLHPFGLLWSELEGNPTRQSQPMNMPSTMGMSGPLFVHSPS
APSHFGGDQNIDETWSNFHDKAPISNAHIFWDSLDTQQFSHHDQESNHRELAEHIISRQL
QQQQQQQQRIQQRNRLSQLSHLNQSLLDQVPGRASLHQQLSNQPLSELERIMALEQQRQL
ELQHHLQQQQLQKIFLQEQESQARQLHEQFFHGPEAGFAHSRIDPTTSLDQILLKQHLRD
SQTHLHQSSRHSDPILEQLIQAKLGHTTHQDRQADLLEMMQHTRNEPFRSHQMLQQEQLQ
AQQMSMGVRHRLEMGEGSPTGSVWPVEEAEHFLRNPVGSQRAHSAAFSPPPFSPLDMLHQ
QQHREKEEQLRDFERNLLQERLNRGLYDPGMPMQGGVSGGNLELANAMARLQGLDIQDPN
SHVRSAGQLGSFNSGTHTHHAHHPYVPNEFNTHFDVEGHWHDNDSRMSNDWMDSYMHQLD
VHPEQQKREQLHGEDNSKRLLLELLHQKTNNQPTQPLSLNDRAPSERRTPSGFFTGSSSA
EHLFNLAHDHDVSLASPASVPSFLNMPAEQTQLRDEQRGGVDPSGLSGRSNSGLVVEAES
IYPGISKNSSLIYNIVDMSGSSYIDREFSEEGKKWAPKVEDLVNLSVIDMSESPSKQPDV
ALIDEREIQASSINRQNSIGVAAGQGAFYNEKFGQSNSFAEEVDRIPTVLSRGSNNVLFK
RPFVSRPLSSQEGMSDLVNDAVTSGTNPSISTLDGGRRDLGGNTTVQVPDTSKNDMRFRR
TNYCSDSDVSDTSFIDMLKSNAKKPPQPEAHATGASESYDATHGGKSGKKKGKKGRQIDP
ALLGFRVTSNRIMMGEIQRIED
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcgcaaaattgatctaccgcacgatctccatctatcaaccaccaaagcctct
ttagaaaatggtgatgaaaaggtcacattgcgattccttgatgaggttaaagatcaagca
gcttctgagaacagcattccactttccccgcaatggctccatgctaaacctggcgatgct
aagccggatgctcgtggcatgaacacgttgtctcttggaaatcccaatgatcagattcag
aaggaaaatgacaagaaggactggaggaaactggcttccgaaaatgagagcacaagacgt
tggcgtgaggaagaaagggaaacgggtttgcttggtagaagagatggcaggaaaactgat
cgccgcgttgaaaatgtttctatcagagaaagtaccgatgcaagaagtttgccttcttct
gaccgttggcatgattctacaaatcgcaactctgtccatgaggcaaggcgtgatagcaaa
tggtcatctaggtggggtcctgaagagaaggagaaggaatcacggcttgaaaggagaaca
tatgtggaaaaggaagatgctcatattgatggtcaatcaagtggaagtggcagtcgtgat
actgaactgcgtgataagtggaggcctcgtcatagaacagaacctacttccggcgcacct
acttcacaccgtgctgcgcctggctttggggttgataaaggaaagctggatgttcgtaat
ttcggatttactgttggaagagggaggtcaagtgggggatctattgtaaagcctccactg
gggagtacaagtgctactgtcctagttgacaagaatgagtgtattcttggcaaaccaaat
ctttctgtggagccttttcgttactctagggccaagattcttgacatttaccgtctacaa
aaacttgatgcaacttccttttgcaagcctgatttaatggaagaagttcccttgttaacc
cgggtggaggctgttgagccattggctttcattgcaccagatgctgaggaagaggtaata
cttaatgatgtatggaaggggtcaattactggcagtggagcttcttacagtccattcaaa
cagggcaagttagctgaggctgccacaggcactggcgacatggattctcttgaagaaaat
cagagtgtctttcctgctaatattgtggaggacactgttgacgaaagacctgctgaatat
gatgcagcaactaaactttctgtcacagaatctgagggaccaatgtcaggagttccaaca
attgctgatgcagatgcagatgtagatgctgatgatgacaattataatcttagggcggct
gagaatgaccatgctgcttttgatatcagcattaaacttccagatgattcaaactcattg
tttgtgtcagaatctctagatgatagccgttgtaacaatctttctcagtgtgtgagagat
gctaattctgtgggagacggtgtatctcctgaggggttaagcttatattaccttgatcct
cagggtgaaatacagggtccttttcttggggtggacattatttcatggttcgaacaaggt
ttttttggtgctgatttaccagttcgcttggcagatgcttcagaaaatgccccttttcat
gagttgggtgatgtaatgcctcacctcgtagttcaggacgggcttggtattaactcagat
attggttccaagatggataatctcggaggttctgcacgttccagcgagatcaatgatttg
agcacattaaattgtcaatcttggcagttgcctgaactggacaatcacttaaatcagcca
gctcactctcgaatattggagcatgatatttcttcgcaacatgcattttctgatggaaaa
ggtttttataattcgtctgcccaggaagaagaaattgttttccctggaagaccagggagt
ggtgataaccatgttagaggtttgagaagtgctgatgggcccattgcaaatattgccggg
tatcataattttccaaatgaaacaagaaaaacctgcatgccaattcaaaaggatgataag
ctgcacccttttggcttgttgtggtctgaacttgaaggtaatcctaccagacaatcccag
cccatgaatatgccttctaccatgggtatgtctggtcctctttttgttcattcacccagt
gcgccttctcatttcggcggagatcagaatattgatgaaacgtggtccaactttcatgac
aaggctccgatttctaacgcacacatattttgggactcattggatacccaacaattttct
catcatgatcaagaatctaatcatcgtgaattagctgaacatataatatcgagacaactc
cagcagcagcagcagcagcagcagcgtattcaacaaagaaatcggttgtctcaactttct
cacttgaatcagtcgcttctagatcaagtgcctggtcgagcttcactccatcaacagctg
tctaatcaacctttatctgaacttgagcgcattatggctcttgaacagcagcgtcagctg
gagctacagcatcatttgcaacaacagcagcttcagaaaatttttctgcaggagcaggaa
tcacaagctagacaactccatgaacagttttttcatggtcctgaggctggctttgctcat
tctcgcatagatcctaccacgagcttggatcagattttgttgaagcagcatctgcgtgat
tcacaaacccatttgcaccagtcttctaggcatagtgatccaattctggaacagcttatt
caagcaaaattaggtcacacaactcatcaggatcgtcaggccgatctgttggaaatgatg
cagcatactcgcaatgaaccatttcggtctcatcagatgctccagcaggagcagctacag
gcacagcaaatgtcaatgggcgtaaggcatcggcttgaaatgggggaaggaagtccaact
ggctccgtttggccagtggaagaagcagagcattttcttcgaaatcctgttggttctcaa
cgagctcattctgccgctttcagcccacctccatttagccctttagacatgctgcaccag
cagcagcacagggaaaaagaggagcagctaagagattttgaacgaaaccttttgcaggag
agactaaatagaggactatatgaccctgggatgcctatgcaaggtggagtttcaggtggt
aatttagaattggccaatgctatggcccgattgcagggcttggatattcaagatccaaac
agtcatgtgcgttctgcaggtcaacttggctccttcaattctggcacccatactcatcat
gctcaccacccttatgttcctaatgaattcaatacacattttgatgtcgagggccattgg
catgataatgatagtcgtatgtcgaatgattggatggattcatatatgcatcagctggat
gttcatcctgagcagcagaaaagagagcaactacatggtgaagacaactcaaaaagattg
ttgttggaactattgcatcagaaaactaataatcaacctacacagcctctaagtttgaat
gatcgtgcaccttcagagaggagaacaccttctggtttttttactggatcaagttctgca
gagcatttgtttaaccttgcccatgatcatgatgtcagtctagccagcccagcctctgtt
ccatcttttcttaatatgccggctgagcaaactcaactccgagatgagcagagaggtggc
gttgaccctagtggattgagtggtcgatcgaactctggattagttgtggaggcagaatct
atctatcctggaattagtaaaaattcttctctgatttacaacattgttgatatgagtgga
agctcttacatcgaccgagaattttctgaggagggaaagaagtgggctcccaaagtagaa
gatttggtgaatttatcagtgattgatatgtcagagtcaccttcaaagcaacctgatgtt
gcactaatagatgaaagggagatacaagccagttccatcaacaggcagaactctattggt
gttgccgctggacaaggtgctttctacaatgaaaagtttggccaatctaattcctttgcc
gaagaggttgataggatacctactgttctttccagagggtcaaataatgtcttatttaaa
cgtccatttgtgtctcgtccattatcttctcaagaggggatgtctgatttagttaatgat
gctgtcacttcaggaacaaacccatcgattagcactcttgatggtggaagacgagactta
ggaggcaacacaactgtccaagttcctgatacttctaaaaacgatatgcgattcaggcga
actaattattgtagtgattctgatgtctcggatacatcattcatagatatgttaaagagc
aacgctaagaagccaccacaacctgaggcacatgctacaggtgcttcagaatcttatgat
gctacccatggtggtaagagcgggaagaagaaaggaaagaaaggaaggcagattgatcca
gctcttcttggttttagggtaactagcaatcgtatcatgatgggcgagattcaaagaatc
gaagattaa
DBGET
integrated database retrieval system
