Amaranthus tricolor (tampala): 130821787
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Entry
130821787 CDS
T09367
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase 7
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130821787
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130821787
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130821787
NCBI-ProteinID:
XP_057543549
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Position
8:30646457..30650167
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AA seq
286 aa
AA seq
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MSLITLINKFTCLCEATNPIDACWRCQSNWAENQKRLADCGIRFGKGTTGGKVGRFXEVT
DPLDNDMINPKFGTLRHVVIQLEPLWIIFDRSMNIRLSQELIMTGDKTIDTRGASVHIAN
GAGITIQFVKNVIIHGLHIHKSNIYAGNGGYIRDSTTHFGFRTKSDGDAISIFGSSNVWI
DHLSMERATDGLIDVIQGSFAVTISNCHMADHNEVTKREAPESEWKSWTWRTEKDLFLNG
AYFRESGSNEISNNNKAGMFTPMDGTMVGELTRFAGPRKWLPGNPC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcatcactttaatcaacaagttcacttgtctatgcgaagcaacaaaccctatc
gacgcttgttggagatgccaatcgaattgggcagagaatcaaaagagactagccgattgc
ggcatcaggtttggcaaggggacgaccgggggaaaagtcggacgattttaagaggtaacg
gaccctttagacaacgacatgattaacccaaaatttggaactctacgacatgtagtgatc
cagttagagccactttggatcatatttgataggtcaatgaacataagattaagccaagaa
ttgatcatgacaggcgacaaaacaattgatacaagaggagcgagtgtacatattgctaat
ggggcaggaattactatacaatttgttaagaatgtaattatacatggtctacatattcat
aaatcaaatatatatgctggtaatggagggtatattagggattctacaacccattttggg
tttagaacaaaaagtgatggtgatgctatttctatttttggatcttcgaatgtttggatt
gatcatctttctatggaaagagctactgatggacttattgatgtaattcaaggatcattt
gctgttactatctccaattgtcatatggctgatcataatgaggtgacaaagagggaagca
ccagaatcagagtggaagtcatggacatggagaacagagaaagatttgttcttgaatggt
gcatattttagagaatcaggaagcaacgaaattagcaataataataaagctggaatgttt
acaccaatggatggaactatggtcggtgaattaacaagatttgctggtccacgcaaatgg
ctgcctggaaacccttgctag
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