Amaranthus tricolor (tampala): 130821805
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Entry
130821805 CDS
T09367
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130821805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130821805
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130821805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
UL141
Motif
Other DBs
NCBI-GeneID:
130821805
NCBI-ProteinID:
XP_057543569
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All DBs
Position
8:complement(29718918..29725798)
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AA seq
395 aa
AA seq
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MFGASTSTFGTPSSTPAFGTPSSTPAFGTPSSSPLFGTPSSTPAFGTPSTTPAFGASTPS
STPGFGTPSSPFLGSSLFNTPSPFQNTQQQQQQQTTPFSVPNTGFGFNTQQQQQQQTTPF
SLGVQQLTTQMAPVAPLPFSMAERDIQAIVDAYKDEPTNPKYAFKHLLFSVTDPQFRIKP
AGISDIMWAEAMGKLEGMDSTNRERLWPQLVKGFKDLSHRLKLQDEVIVSDADRLRMTQC
NVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKGEVELAEK
LASIVRQLKGSGADLSRRVQNLLTVSRVQANANGGSISVYLLGSSKIHERSLSDMQEVLQ
QQTDAIARLGNVLKRDIRDMEIIMSEDTEMIEDAS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagcatcaacttcaaccttcggtactccatcttcaactccagcattcggaact
ccatcttcaacgccagcattcggaactccatcttcttcacctttattcggtactccatca
tcaacacctgctttcggtactccatcaacaacaccagcattcggagcttcgactccatcg
tcaacaccaggtttcggtactccatcttcgccatttcttggatcttctcttttcaatact
ccttctccatttcagaatactcaacaacaacaacagcagcaaacgacgccgttttctgta
cctaataccgggttcgggtttaatactcaacaacaacagcagcaacaaacgacgccgttt
tcgcttggtgttcaacagcttactactcaaatggctcctgttgctcctttgcctttctcc
atggctgagcgtgatattcaagcaattgttgatgcgtacaaagatgagccgacaaatcct
aaatatgcttttaagcatttgctattcagtgtcacagatccacaatttaggatcaaacca
gctgggatatcagatattatgtgggctgaggcgatgggaaaacttgagggcatggatagt
actaatcgtgaacgcttatggcctcaacttgtcaaaggcttcaaggatctctctcaccgt
ttgaagctacaagatgaagtaattgtttcagatgcagatagattacggatgacccaatgc
aatgtgaaaacgcttcaaaggcatttccaagctgacactttacctcgcattgagagattg
aaacaaaaagaacaaggtcttcaaagacgcttattaagggtgatgagaattgtagaagct
cttgagggaaaaggttgtcgtttgcctttaatgaaaggggaagttgaattggctgagaag
ctggcttcaatagttagacagctcaaagggtctggtgctgatctttcaaggagggtacaa
aatctgttgacagtatctcgtgttcaggcaaatgccaatggtggtagtatctctgtatat
cttctaggttcatctaaaattcacgagcgaagtctttctgacatgcaggaggttttgcaa
cagcagacggatgccattgctaggcttggcaatgtactgaaaagagacattcgggatatg
gagataatcatgtctgaagatacagaaatgattgaagatgctagttga
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