Amaranthus tricolor (tampala): 130821818
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Entry
130821818 CDS
T09367
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
130821818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130821818
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
130821818
Membrane trafficking [BR:
atri04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
130821818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
130821818
NCBI-ProteinID:
XP_057543590
LinkDB
All DBs
Position
8:27275758..27293553
Genome browser
AA seq
1019 aa
AA seq
DB search
MAELVAAIIAAMVIMSVNLVESKFMVYNTSAKIVPGKLNVHLVPHTHDDAGWLKTVDQYY
VGSNNSIQGACVQNVLDSLIPALLADKNRKFVYVEQAFFERWWRDQSEAMQHIVSDLVKS
GQLEFINGGMVMHDEAATHYIDMIDQTTLGHRFLKKEFGLTPRIGWQIDPFGHSAVQAYL
LGAEVGFDSLFFARIDYQDREKRMADKSLEVVWQGSKSLGASAEIFTGAFWQGNYEPPDG
FHFEVNDDSPIVQDDPTLFDYNVQDRVNAFVDAALAQANVTRTNHVMWTMGTDFKYQYAY
SWFRQMDKLIHYVNLDGRVNALYSTASIYTDAKHATQEIWPTKTDDFFPYADRINGYWTG
YFTSRPTLKRYVREMSAYYMAARQLEYLIGRRKLGPNTDALADALAIAQHHDAVTGTEKQ
HVANDYAKRLSIGYQEAEALVALSIGCLTESSPSTSCQKPTTKFQQCPLLNISYCPASET
DLSHGKNLVIVVYNPLGWKREDIIRIPVKSESFVVRDYEGREIVSQVLPISDVQLSLSKF
FVTSYLGVTVRDAPNYWLAFRASVPPLGFSTYTVSGVKGSKLTRSSVDTHQGNKKFTFDI
GSEILKVQLSENGKLIYDNKKRKLGKKSVEVSYGFYAGYEYNETEKYPQASGAYVFRPNG
TFMMLSKGKVQSTVVRGPLINEVHQQINSWIYQVTRAYKDNEYIEVEYTVGPIPVEDGIG
KEVVAKLSTDIQSNKKFYTDSNGRDFIERIRDYRSDWDLQVNQPVAGNYYPINLGIYLQD
GMSEFSVLVDRSVAGSSILDGQIELMLHRRLLKDDGRGVAEALNETVCALEKCIGLVAQG
KFYIKIDHLGEGAKWRRSFGQQIYSPLLLAFSEQDEDTGLNTRIPMFSGMDSSYSLPENV
AMITLQELDDGKVLLRLAHLFEVGEDKDLSGTAKVELKKLFSSKKIEKIMETNLSANQER
AEMEKKRLVWKSQSSSAKASKVTRGGPIDPTDLIVELAPMEIRTMLIEFSQKSDRIFDI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattagtagcagcaattattgctgcgatggtaataatgtcagttaatttagta
gagtcgaagtttatggtctacaatacatcggcgaaaatagttccgggaaaactcaacgtt
catttagttcctcacactcacgacgatgctggttggttgaaaaccgttgaccagtactac
gttggttctaataactccattcagggagcatgtgttcagaatgtattggactctttaatt
ccggcattactagcggataagaataggaaatttgtttatgttgagcaggcgtttttcgag
cggtggtggagagatcagagtgaggccatgcaacacatagtcagcgacttggtcaaatct
ggtcaacttgaattcataaatgggggcatggtcatgcatgatgaggctgctacacattac
attgatatgattgatcaaacaacacttggacaccgattcttgaagaaagaatttgggctg
acacccagaattggatggcaaattgacccttttgggcattcggctgttcaggcttatttg
ttgggggctgaggttggatttgattccttatttttcgctagaatagactatcaagatagg
gaaaaacgtatggctgacaaaagccttgaagttgtctggcagggttctaagagtcttggg
gccagtgctgagatctttactggtgctttttggcaaggaaattatgaacctccagatggt
tttcattttgaagttaatgatgactctccaattgtccaagatgaccctaccttgttcgac
tacaatgttcaagatcgtgtcaatgcctttgttgatgctgcattagcacaggcaaatgtt
actcgaacaaatcatgtaatgtggaccatgggaactgatttcaagtaccaatacgcttat
tcatggttccggcaaatggacaagctgattcattatgttaacttggatggacgtgtcaac
gcgctctactcgaccgcatcaatatacacggacgcaaaacatgcaactcaagaaatctgg
ccaacaaaaactgatgatttcttcccatacgcagatagaattaatggttactggaccgga
tactttactagcagaccaactttgaagcgttacgttagagagatgagtgcctactatatg
gcagcaaggcaactggaatatcttataggaaggcgtaaattaggccctaatactgacgca
ttagcagatgctttagctatagctcaacaccatgacgcagttactggtactgaaaagcag
catgtagctaatgattatgcaaaaagactttcaattggttatcaagaggcggaggcattg
gttgcattatcaattggatgccttactgaatcttccccctctactagttgtcagaagcca
acaacaaagtttcaacagtgtcctctgttaaatataagttactgtcctgcatcagaaact
gacctgtctcatgggaaaaatttggttattgtagtctataatccccttggatggaagaga
gaagacattattcgcattccggttaagagtgaatctttcgtagttcgtgattatgaagga
agggagatagtgtcacaagtacttcctatatctgatgtgcaattgagcttaagtaaattt
tttgtgacttcatacttgggggtaactgtaagagatgcacctaactattggcttgcattt
agagcatctgtaccacctcttggtttcagcacgtatactgtatctggtgttaaaggttct
aaattgacaagatcatctgttgacacacatcaaggaaataagaagtttacttttgacatt
ggatcagagattctgaaagttcaactctctgagaatggaaagttgatttatgataacaaa
aagagaaagttgggtaagaaatctgttgaagtatcttatggtttttatgctggatacgaa
tacaatgaaactgagaaatatccccaggcttccggtgcctatgtgttccgtccaaatggc
acatttatgatgctatctaagggaaaggttcaatccactgttgtgcgcggtcctttgata
aatgaagttcatcagcagataaattcatggatttatcaggtcaccagggcttacaaggat
aatgagtatatcgaagttgaatacacagttgggcctataccagttgaagatgggattgga
aaagaagttgtagctaaattgtctactgacatacagtcaaataaaaaattctacacggat
tcaaatggtcgtgatttcattgaaaggattcgtgattatagatcagactgggatttgcaa
gtaaatcaaccagttgctggaaactattatcctatcaatcttggaatatatttgcaagat
ggtatgagcgaattctctgttttggtagatagatctgttgctgggtctagcatattggat
ggtcagatagagctcatgcttcatagacggttgctcaaagacgatggtagaggtgttgca
gaagctctaaatgaaacagtttgtgctcttgagaagtgcataggcttagttgcccaagga
aaattttatatcaaaattgatcatctaggagagggtgccaaatggaggcgttcatttggt
cagcaaatatactctccacttctcttggccttcagtgaacaggatgaagacaccgggttg
aatactcgtataccaatgttttcaggaatggattcaagttacagtttacccgaaaatgtt
gcgatgatcacccttcaggaacttgatgatggaaaagtcctgcttcgcttggcacatctg
tttgaggttggagaagacaaggacctttcaggcacggcaaaggtagaactgaaaaaacta
ttctcgtcaaagaagattgaaaaaataatggagacaaacctttcggcaaatcaagagcga
gcagaaatggagaagaagagactggtttggaagtctcaaagctcttctgcaaaggcatcc
aaagtgacacgaggcggaccgattgatcctacagatctgattgtggaacttgctccaatg
gaaattcgtacgatgctgattgaattcagccagaaatctgacagaatctttgatatttga
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