Amaranthus tricolor (tampala): 130822081
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Entry
130822081 CDS
T09367
Name
(RefSeq) tubulin alpha-5 chain-like
KO
K07374
tubulin alpha
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04145
Phagosome
atri04517
IgSF CAM signaling
atri04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130822081
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130822081
09142 Cell motility
04814 Motor proteins
130822081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130822081
03036 Chromosome and associated proteins [BR:
atri03036
]
130822081
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atri04812
]
130822081
04147 Exosome [BR:
atri04147
]
130822081
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130822081
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130822081
Cytoskeleton proteins [BR:
atri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130822081
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130822081
Exosomal proteins of other body fluids (saliva and urine)
130822081
Exosomal proteins of colorectal cancer cells
130822081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
130822081
NCBI-ProteinID:
XP_057543618
LinkDB
All DBs
Position
1:39960446..39964207
Genome browser
AA seq
449 aa
AA seq
DB search
MREVISVHIGQAGIQVGNSCWELFCLEHEIQPDGMMPSDASIGVEHDSFNTFFSETSSGK
HVPRAVFIDLEPTVIDEVRTGPYRQLFHPEQLLSGKEDAANNFARGHYTVGKDMIEVCLD
RVRKLADSCTGLQGFLVFNAVGGGTGSGFGSLLLERLSVEYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVSVVLDNEAIYDICRRSLSIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITTSVFEPTS
MMAKCDPRHGKYMAACLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTSVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGGEDDDEEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagtaataagtgttcatatcggtcaagctggaattcaagtgggaaattcttgt
tgggagcttttttgtcttgaacatgaaattcagcctgatggaatgatgcccagtgatgca
tctataggtgttgaacatgattcattcaacaccttctttagtgaaactagttcagggaag
catgtgccaagagctgtgttcatcgatttggaaccaactgtcatcgatgaagtccgcaca
gggccttaccgacaactatttcatccggagcagctcctctctgggaaagaagacgctgcc
aacaactttgctcgaggacactatacagttggaaaggatatgatcgaagtgtgccttgat
cgggttaggaaattagccgatagctgcactggactgcagggcttcttggtgttcaatgct
gttggtggtgggactggttctggtttcggttccttgcttttggaacgcttgtctgtcgag
tatggtaaaaaatccaaactcggatttacaatctatccttctcctcaggtatcaacagcc
gtcgttgagccatacaacagtgttctttccactcattcacttttggaacacaccgatgtc
tctgtggtcttagacaacgaagcaatatatgatatatgtagaagatccctaagcatcgag
agaccaacatatacgaacttgaaccgcttaatatcccaaataatctcttcgttaacgact
tctttgaggtttgacggagccatcaatgtggatattaccgagttccaaactaacctcgtg
ccttatcctcgtatacatttcatgttatcatcgtacgcaccagtcatctcagctgaaaag
gcttaccatgagcaattgtcagtacctgagatcacaacctctgtgttcgagcctacgagt
atgatggcgaaatgtgatcctagacacgggaaatacatggccgcgtgtttgatgtatcgc
ggtgatgttgttcctaaagatgtcaatgctgctgttgccaccatcaagacgaaaagaacg
gttcaatttgtcgattggtgcccgactggattcaagtgcggaatcaactaccaaccgcca
acagtagtaccgggtggtgatctagcgaaggtacaacgcgcagtatgcatgatcagtaac
aatacttctgtagctgaagtattcgcgagaattgatcataaattcgaccttatgtatgca
aaaagagcgtttgtgcactggtatgtcggtgaaggtatggaagaaggcgagttttctgaa
gctcgagaggacttagctgccctcgagaaagactatgaggaagtcggtgctgagggcggt
ggtgaagacgacgatgaggaggaatactaa
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