KEGG   Amaranthus tricolor (tampala): 130822380
Entry
130822380         CDS       T09367                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1-like isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:atri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    130822380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atri04131]
    130822380
Membrane trafficking [BR:atri04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    130822380
   mTORC2 complex
    130822380
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 NBCH_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_VPS8 Nucleoporin_N Beta-prop_NUP159_NUP214 Ge1_WD40 PROPPIN Mala_s_1-like
Other DBs
NCBI-GeneID: 130822380
NCBI-ProteinID: XP_057543638
LinkDB
Position
1:41347810..41353994
AA seq 329 aa
MSQPKVILATASYDHIIRFWEAQTGKCYRNVQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDINSSSPQPVMSYDSHTNNVMAVGFPSDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELNICAQVPEVDTAVRSLTVMYDGT
LVVAANNNGTCFVWRLLSETQTMTNFEPLHRLQAHKGYILKCLLSPEYCEPHRYLATASS
DHTIKIWNVDNRFTLEKTLTGHERWVWDCVFSVDGAYLVTARPRLPLRHCSTWDVYADYL
DLFKCVHFEEVGKLMCERGEIMQMSREKT
NT seq 990 nt   +upstreamnt  +downstreamnt
atgagtcaacccaaggtgattctagcaacggcaagctatgaccatattattcgattttgg
gaggctcaaactggcaaatgctatcgtaatgtgcaatacccagattctcaagttaatagg
ctcgaaataaccccggataagcgatatttggcagcagctgggaaccctcacattcgattg
tttgatatcaattcgagtagccctcaaccggtgatgagttatgattcacatacaaataat
gtaatggcagttgggtttccatctgacggaaattggatgtattctggttcagaggatggc
actgtgaagatatgggaccttagagctccaggttgtcaaagagaatatgaaagccgtgct
gcagttaacaccgttgtcctgcacccaaatcagactgaactaatatcaggagaccagaat
ggcaatattcgagtttgggatttgacagctaattcgtgtagctgtgaattgaatatttgt
gctcaggttccagaggttgatacagctgtgaggtctttgacggtaatgtatgacggaacc
ttggtagttgctgcaaataataatggaacttgctttgtttggcgtttgttaagcgagaca
cagacaatgacaaattttgagccgcttcatagacttcaagcgcacaaaggatacatcctt
aagtgccttctttcaccagaatattgtgaaccacatagatatttggcaactgcatcatct
gatcatactatcaagatatggaatgtggacaaccgtttcaccttagagaaaactttaact
gggcacgaacgctgggtatgggactgtgttttttctgtagacggtgcctatcttgttaca
gcacgcccaagactaccactgcgccattgttcgacgtgggacgtatatgcagactacctt
gatttgtttaagtgtgttcattttgaagaagtgggaaaactcatgtgtgaaagaggagaa
ataatgcagatgtcaagagaaaaaacttag

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