KEGG   Amaranthus tricolor (tampala): 130823138
Entry
130823138         CDS       T09367                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03030  DNA replication
atri03410  Base excision repair
atri03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130823138
   03410 Base excision repair
    130823138
   03450 Non-homologous end-joining
    130823138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atri03032]
    130823138
   03400 DNA repair and recombination proteins [BR:atri03400]
    130823138
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atri04147]
    130823138
DNA replication proteins [BR:atri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    130823138
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     130823138
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     130823138
Exosome [BR:atri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130823138
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc PM2_P3
Other DBs
NCBI-GeneID: 130823138
NCBI-ProteinID: XP_057543744
LinkDB
Position
9:10262206..10272398
AA seq 380 aa
MGIKGLTKLLADNAPKCMKEQKFESYFNRKIAIDASMSIYQFLIVVGRTGTEMLTNESGE
VTSHLQGMFSRTIRLLEAGIKPVYVFDGLPPDLKKQELAKRYAKRADATDDLTDAIEKGD
KESIEKYSKRTVKVTKQHNDDCKKLLGLMGVPVVEAPCEAEAQCAALCKSGKVYAVASED
MDSLTFGAPKFLRHLMDPSSKKIPVMEFQMAQVLEELNLTMDQFIDLCILSGCDYCESIK
GIGGLTALKLIRQHGSIENILENLNKERYQIPDNWPYQDARLLFKEPLVLSSNEEPELKW
GPPDEEGLVNFLVKENGFNIDRVTKAIEKIKAAKSKSSQGRLESFFKPVATDSAPIKRKE
KVDAPKGTSNKKQKSGGRKK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggggattaagggtttaacgaagctacttgcggataatgcacctaagtgtatgaaagag
cagaaattcgagagttattttaacaggaaaatcgctattgatgctagcatgagcatttat
caattccttattgttgttgggagaaccgggaccgagatgcttacaaatgaatctggggaa
gttactagtcacttgcagggcatgttttcacgaactattaggctgctggaagcgggaata
aagcctgtctatgtttttgatgggctgccaccggatttgaagaaacaagaacttgccaaa
cgctatgccaaacgagctgatgctactgacgatttgacagatgctattgagaaaggtgat
aaagaaagtattgagaagtacagtaaacgaacggtgaaggtgacgaaacaacacaatgat
gactgcaaaaaacttttaggcttgatgggagttcctgtggttgaggctccgtgtgaagca
gaggcacaatgtgctgccctttgtaaatctggaaaagtttacgctgttgcttctgaagat
atggattctcttactttcggggctcccaaatttctccgtcatttgatggatccaagctcg
aagaaaattccagtcatggagtttcaaatggcacaggtcttggaggagctaaatcttaca
atggatcaattcattgacttgtgcattctctctggctgtgattactgtgagagcataaaa
ggtattggtggactgactgcattgaagctcattcgtcaacatggatccatagagaacata
cttgagaacttaaataaagagaggtatcagatacctgacaattggccgtatcaggatgcc
cgactcttattcaaagaacctctagtgctgtctagtaatgaggaacctgaactcaagtgg
ggccctcctgatgaagagggtttggtgaactttctagtgaaggagaatggctttaatatt
gatagagtaacgaaggcgatagaaaagattaaggcagctaagagcaagtcatcacaagga
cggttggagtcattcttcaaacctgttgccactgattccgctcccatcaaaaggaaggaa
aaggtggatgccccaaagggtacatcaaataaaaagcagaagagtggtggaaggaagaag
tag

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