Amaranthus tricolor (tampala): 130823373
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Entry
130823373 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130823373
Organism
atri
Amaranthus tricolor (tampala)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_3
RVT_1
RT_RNaseH_2
RT_RNaseH
rve
Integrase_H2C2
Retrotrans_gag
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
130823373
NCBI-ProteinID:
XP_057543977
LinkDB
All DBs
Position
9:complement(21529423..21535752)
Genome browser
AA seq
1652 aa
AA seq
DB search
MLARNLTAAFSEQLRAVMNNNNPAPQQVLDDMADQIKNLRERIEPPNETPKSHESQDGNS
EMSRSSKRNKRRRERPRTHTSLGRSDPRDRESKTASQDARTYLESKKHKASESIQSLVDR
RREERKRAQLVGSNHPASPVTMPRNEDEVKILPGDPTPIISPMAPEILNIPNPGKIKIPN
MAAFDGTSCPEEHLMAYKNLMLEGKFLGHFIASRRQEKSNFHLLSVTQLEGESISSYLKK
FHEAVLEVTDLEESVALNALINGMKAQRLKFQLVESQVKTYAEAMKQCQSYVTASEVCQA
HDPKRRKSDKKDAATPHQSSRNREEHQPRRERNHTPRRPAPPSDMGPPRSHHIYTAAGES
RTRNLLDGGNDPMFNRNRRDIFFAVRDKLPTPPPTTTPSNRRNYNLWCDYHKEHDHTLAQ
CRELKRILYQLADEGKLSRFLNKRDYDTEEGANRRQWNQRRGSPKREEARREGSHTQGTI
NMIFGGYTEEYPTVRAAKDSVHTLLKRPTTTVIGGPVMKFDATTSQTLQQPHTDPLFEEK
HLQPLDKPLIGFGGSQVIPLGTIILPVRVGERSESRTLPIRFTVVDLAFPYNAIMGLPLI
NKIKAAIFPHQLLLQFERDDGKVGILKGDQITARQCLINTLKRGHSATPAKREREDQDAP
AVMSVYMENPSTHERPRPIERYEAVDMFEGKQLKIGKDLPGTIKQEIVATIVEFRDVFAF
STEEIPGIPTSVMCHKLDIRPGHKPVKQKLRHQGKERTEAAKEEVEKLLRAGFIRECKYS
DWLSNVVLVKKPNGKWRMCVDFTDLNRACPKDDYPLPKIDRLVDSTAGHALLSFMDANAG
YHQIQLAPEDQIHTAFITSMGVYCYKVMPFGLKNAGATYQRMHAADLRETFNTLRKHQMK
LNPDKCVFGVTGGKCLGFLVDERGIEANPDKIQAIQNMRSPTSVKEVQKLTGCIAALGRF
LSKSADKCLPFFKTIKQQKFEWTAEAEESFRQLKEHLSALRKLVSPINGEKLVLYVSVSE
YSLSGVLVAEREKKQLPIYYVSHAFRGSEGNYCEVEKVIFAIVMASRKLKPYFQSNPIIV
RTDQPLKKILEGKNKSSRVTDWANQLADFGIEYESRTAIKAQALADFIAESTSPPPAELN
REWKLYVDGSSTQSASGAGLLIVSSAGVRMERAVRFEFAASNNEAEYEALLMGLKICYEA
GAKELAAFSDSQLIVGQVNGEFEAKDDSMKMYLQQVKDFIPKFDNFTFEHIPRSQNAQAD
SLAKLASSADTSAARDIIWEVLPNPSINLMINTIDRSETWMGPYVKYLQDQTLPQDENQA
KMLQKKAKWFELHEGTLYKKSYTHPLLKCVAPEEGNYILREIHEGGCRIHQGVRTVISKV
LRSGYYWPSLRKDAEELILRCPECQYHSKKGRKPSNYLTVLQAVLPFDKWGMDLLGPFPP
AKGQRKFIIVAIDYFTKYVEAEALSSITDKQVCQFLWRNIITRYGIPRVIITDNGRQFVS
KNTIEYCDKFHIQIRFSSVSRPQTNGQVEFANKEILNGIKKKIEGVKGNWDEELPGILWA
SRTTIKEATGHTPFSLVYGSEALNVPCTQRRQVGPSDKGPEVQPAATLMNRTLKLVPRSK
LSNLQVQAVTSIKGCFPPNEGEKPRPVKESLK
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgctagcacgaaacctcactgctgcgttttccgaacagctccgcgctgtcatgaataac
aataatcctgctccacaacaagtattggatgatatggcagatcaaataaaaaatctacgg
gaacggatcgagccccctaacgagacacccaaatcccacgaatctcaagatgggaactcg
gagatgtcacgttccagcaagagaaacaagaggcgacgggagagaccaaggactcacaca
agcctcggcagaagtgatcctagagacagagagtctaaaaccgcctctcaagatgcccgt
acttatttagaaagcaaaaagcataaggcatccgaaagcatccagtcactggtggatcga
cggagggaagagaggaagagggcgcagctggtaggatccaaccatccagcgagtcctgta
accatgccgcggaacgaagatgaggtcaaaatcctccctggagatcctacgcccataatc
tctccaatggctcctgaaatacttaacattcccaacccggggaaaataaaaatcccaaat
atggcggcgtttgacggaacgtcatgccctgaagaacacttgatggcgtacaagaacctg
atgctagaaggcaaatttctaggccactttatagcctcaagaaggcaggagaaatcaaat
ttccacctactaagtgtcactcaattggaaggagaatccatatcctcctatctgaagaaa
ttccatgaggcggtgctagaggtgacagatttagaggaatcagtcgccttaaacgccctt
atcaatggaatgaaggctcaaaggctcaagttccagttggtggaaagccaggtcaagaca
tatgcggaggccatgaagcaatgtcaaagttatgtcacggcctccgaggtatgtcaggca
cacgaccccaagaggcggaagtctgacaagaaagacgccgcaaccccccaccaatcctcg
aggaacagagaagagcaccagccgaggagggaaagaaatcacacgccgcgtcgtcccgcg
cccccttcagatatgggacccccgcgttcccatcacatttataccgcggcaggggaatcc
agaacacgcaatttgttagacggaggaaacgacccgatgtttaatcgaaacagaagggat
attttctttgccgttcgcgacaagttgccaactccacctcccactaccactccttccaac
aggcgcaattacaatttgtggtgtgactaccacaaagagcacgaccacaccctcgcccaa
tgtcgcgaactcaagcgtatcttgtatcagctggccgatgaaggaaagctttccaggttc
ctcaacaagagggactatgacacggaagaaggagcaaacagaaggcagtggaatcaaaga
cgcggatcccccaagagggaagaggcaaggcgcgaaggttcccatacgcaagggaccatc
aacatgatttttggaggatacaccgaggaatatcctaccgtccgcgctgcaaaagacagt
gttcatactctgctgaaaagaccaacaacgaccgtaatcggcgggccggtcatgaagttt
gatgccacgacctctcaaacgctgcaacagccccatactgaccctctgttcgaggaaaag
cacttgcagcccctcgataagccgctgatcgggtttgggggaagtcaggtcattccgcta
ggaacgatcattctccccgtgcgcgtgggagaaagaagtgaaagcaggaccctgcccata
cgtttcacggtagtggatctcgctttcccttacaacgccatcatgggacttcccctcatt
aacaagatcaaagctgcaatcttccctcatcaactcttgttacaattcgaacgggacgat
gggaaagttggcatcctcaagggagatcagataacggcacgccaatgccttataaacact
ctgaagcgcggacactccgcgacacccgccaaaagggaaagggaagatcaagacgctccc
gctgtcatgagcgtttatatggaaaaccctagcacacacgaaaggcctcgccccatagaa
agatacgaggcagtagacatgttcgagggaaagcaactaaagatagggaaagatcttcct
ggtacgattaaacaagaaatcgtggccaccattgttgagttccgtgacgtcttcgccttc
agcacggaagaaatacctggcatccctactagcgtcatgtgtcataaacttgacataaga
ccaggccacaaaccagtaaagcagaagctgcggcatcaaggaaaagagcggaccgaggct
gccaaagaggaagttgaaaaattattgagagccggattcattagagaatgcaaatactcc
gattggctatccaatgtcgtcctcgtgaagaaaccaaacggcaaatggaggatgtgtgtc
gatttcacggatttgaatagagcctgccccaaggacgactatccacttcccaaaatagat
cgcctggtggactccacagcaggccatgcgctattaagtttcatggatgccaatgccgga
tatcaccagattcaattggcgccggaggaccaaatacacacggccttcattactagcatg
ggtgtctactgctacaaagtcatgcccttcgggttaaaaaatgcaggagccacctatcaa
aggatgcacgctgcggacttgcgtgaaacgttcaataccctccgtaaacaccagatgaag
ctcaatccggacaagtgtgtgttcggggtcaccggaggaaaatgtctcggcttcttggta
gacgaacggggcatcgaggcaaatccggataagattcaggccattcaaaacatgagatcc
cccacctccgtaaaagaagtgcaaaagcttacggggtgcatagccgcactaggaagattc
ctttcaaaatcggcagacaaatgcttacctttcttcaaaacaataaagcaacagaaattc
gaatggaccgcggaagcagaagagtctttccgtcagcttaaggagcacttatcggccttg
cgaaaactagtttcgcccatcaatggggaaaagctagtcttatatgtctctgtctccgag
tactcgttatccggagtacttgtggcggaaagagaaaagaagcagcttccaatatactat
gtgagtcatgcattccgcggctcagaagggaactattgcgaagtggaaaaggtcatattt
gcgatagtgatggccagcaggaaattaaagccatactttcagtccaacccgatcattgtc
cggactgatcaacctttgaaaaagatccttgaggggaaaaacaagtcgagccgcgtcaca
gattgggcaaaccagctagcagatttcggcatcgagtacgagtctcgaacggcaattaaa
gcacaagccttggctgactttattgctgaaagcacttccccccctcctgctgaacttaat
cgagaatggaaattgtatgtagacgggtcttcaacacaatcggcgagtggggccgggctc
ctcattgtgtcttccgccggggtccgcatggaaagggcggtcagatttgagttcgcggca
tccaacaatgaggccgagtatgaagcattactgatggggctgaaaatctgctacgaggca
ggggctaaagaattggccgcattctcggattcccaattgatagtggggcaagtaaacggg
gaattcgaggctaaagatgatagcatgaaaatgtatctgcagcaagtgaaggactttatt
ccaaagtttgacaacttcacgtttgagcacattccacgatcccaaaatgcccaggccgat
tccctagcaaaacttgccagctccgcagatacttccgcggctcgtgatataatttgggaa
gtgctccccaaccccagcatcaacctcatgatcaacaccatcgacagatctgaaacatgg
atggggccatacgttaagtacttgcaagatcaaacgctcccccaggacgagaatcaggcc
aaaatgctccagaagaaagccaaatggttcgaacttcatgaaggaacgctttataaaaaa
tcatacacacatcccctcctgaaatgtgttgctcctgaagaaggaaattatatcctacga
gaaatacacgaaggcggatgcagaatacaccagggagtgcgaacggtcattagcaaagtc
cttagaagtggttattattggccttcactccggaaagacgcggaagagttgatcctacgg
tgtcctgaatgtcagtatcactcaaagaaagggagaaaaccctctaattacttgaccgtc
ttgcaagccgtcctgccattcgacaagtggggtatggatctccttggcccttttccacca
gcaaaggggcagcgcaagttcatcattgtggctattgattacttcactaagtacgtagaa
gcagaggctcttagttcgatcacagacaagcaagtctgccagtttttatggcggaacatc
atcacaagatacggcataccgagggtgatcatcacggataatggaaggcaatttgtcagc
aagaacaccattgagtattgcgacaaattccacatccaaatcagatttagttctgtgtcc
aggccgcaaactaacggtcaggtagagttcgccaacaaggagatactaaacggtatcaaa
aagaagatagaaggtgtgaagggtaattgggatgaagaactacccggaatcttatgggcc
agtcgaaccaccataaaagaggccacggggcacacaccgttctctttagtgtacgggtcc
gaagccctaaatgttccttgtacgcaacgtcgacaagtcggaccctctgataagggtcct
gaagttcaacctgccgcgacgttgatgaatcggacccttaaattggttccaaggtcgaaa
ttgtcaaatctacaagttcaagccgtgacatcaattaaaggctgtttcccgcctaatgag
ggagagaagccccggccagtgaaagaaagtttgaaataa
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integrated database retrieval system
