Amaranthus tricolor (tampala): 130823562
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Entry
130823562 CDS
T09367
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130823562
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130823562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_ECM29
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
TPR_Trm732_C
HEAT_2
DEAD
IFRD
Motif
Other DBs
NCBI-GeneID:
130823562
NCBI-ProteinID:
XP_057544192
LinkDB
All DBs
Position
9:29382336..29393335
Genome browser
AA seq
2031 aa
AA seq
DB search
MAQQSPQPQQQHQQSSSRLNRLLTLLDTGSTQQTRFAAARQIGGIAKSHPQELNPLLRKV
SQYLRSRNWDTRVAAAKAIGSIAENSRKISIDELVDIARKKIGLDLCRQLRNEASISSFR
SFDINKVLEFGVLLASGGQEYDIKDDNNGNNSKERLARQKRNLRRRLGLDVCEQFMDMND
MIRDEDLVMFPSESGRNFSSGGIDLSKKRGDFRVFRSQRPSARELNLLKRKAKVNSGDVR
SGVNAGMQKAIAPPSSGGGGGSDLGKGLVDSATDEDGVEHEGDGHWPFHGFVEQLLVDMF
DPIWEVRHGSIMALREILTYQGSYAGVSMTDSSSHSGGHVLGSVSEKANLSVKRDRGIDL
NLDVQEDRCIEGSKRVKVEVTQPVTVQIGCKVEQNGETGSSQFVPEANIGSVIMNSESDV
LQAKSLTEGGGSPLIGSVDVTEKKGFAGKVDVVENLGRNPDLMNLAGSVRNSWLRNCEFL
QDCAICFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAVLKYMAPELVRETMNILLQMQM
RPEWEIRHGSLLGIKYLIAVRQEMLSDLLGFVLPACKSGLEDPDDDVRAVAADALIPAAS
TIVSNMDQLLHPIVMLLWDILLDLDDLSPSTSSVMNLLAEIYTHAGMTGNMLDTLTLGSS
QELDLNEVLSFRDDVEAPARKENPYMLSALAPRLWPFMRHTITSVRYSAIRTLERLLEAR
YRKHTSEPSANSFWPSSILGDTLRIVFQNLLLESNDDILLCSERVWRILLHCPVSDLVAA
ARSHISSWLELATTPYGSELDISKMFWPVAPSQKRRVATAAKMRAVKMDSYGGRTVNVAA
GKGIISVDTGDATSLKIVVGADSERSVTRTRVVVSAALGILASKWPESSIYHITDPLWKD
VTSLSGVQRQISAMILISWFKEMKNVEVPAAQVINSALFEQFKKWLLDLLTCTDPSLPTK
DSPLPYAELSRTYSKMRGEAGHLFHLVGSCGLSKDLLLTTNIDLENLSIDDAVDFASKVM
LPNYDFSVESSAENHVIDDVESSRQRLLTTTGYLKCVQSNLHVTVSSLMAAAIVWISDLP
ARLNPIILPLMASLKREQEEILQLKAAEALAELIDVCIARKPGPNEKLIKNLCSLTCMDP
SETPQAGLITSMEVIDEQDLLLCRSMSSNQRSRGRPAATGEDRSKTEGFISRRGAELALK
HLCKKFGALLFDKIPKLWDCLSEVLKPIDLQAEVAAEEQKITVAIESVKDPQLLINNIQV
VRSVAPLLDDALKPKLLILLPCIFRCVRHSHVAVRLAASRCITTMAKSMIVSVMASVVEN
AVPMLGDPASVPARQGAGMLIGRLVQGLGVELVPYAPLLVVPLLRCMSDSDASVRQSVTR
SFAALVPLLPLARGLPPPAGINDSLLRDKEDAKFLEQLLDNSSIDDYKLCTELKVTLRRY
QQEGVNWLAFLRRFKLHGILCDDMGLGKTLQASAIVASDIAEYRTINNGKEPSPSLIVCP
STLVGHWAYEIEKFIDPSVASTLQYVGSAEERIAIRSYFNKHNVIITSYDVVRKDVDFLG
QLRWNYCVLDEGHIIKNARSKITTAVKQLKAQNRLILSGTPIQNNILDLWSLFDFLMPGF
LGSERQFQATYGKPLLAARDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPE
KIIQDRYCDLSPVQLKLYEQFSGSHAKKEISSIVGLDDSKETKDEKVAPKASSHIFQALQ
YLLKLCSHPLLVVSDEAVDSLGHILSDILPNPDILSELHKLHHSPKLIALQEILEECGIG
VDTSNSESMINVGQHRVLIFAQHKALLDIIERDLFRAHMRNVAYLRLDGSVHTEKRFDIV
KAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDLQAMDRAHRLGQKKVVN
VHRLIMRGTLEEKVMSLQKFKVSVANSVINADNASLKTMNTDQLLDLFTPAENSRKGGFK
LKSSDGSSNENKPSGSGKGLKAILNGLEELWDQSQYTEEYNLDHFLSKLNS
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaatctccgcaacctcaacaacaacatcagcaatcatcttcgcggctcaat
cgtcttcttacgctcctcgacaccgggtcaactcaacaaactcggttcgcggcagcgagg
caaatcgggggtatcgcgaaatctcatcctcaggaattgaatccattgctgaggaaggtt
tcacagtatttgagaagtaggaattgggatacgcgtgttgctgcggcgaaagctattggt
tcgattgcggagaattcaaggaagatttctattgatgagttggttgatattgcgaggaaa
aagattggattggatttgtgtcgacagctgagaaatgaggcaagtatttcgtcgtttcgt
agttttgatataaataaagtgttggaattcggggtcttgttggcatccgggggacaggaa
tatgacattaaagatgataataatggaaataattctaaagaaagattggctagacaaaaa
aggaatttacgtaggagattaggacttgatgtgtgtgaacagtttatggatatgaatgat
atgattagagatgaggatcttgtaatgtttccgtcggaatcaggtagaaattttagttct
ggtggtattgatttaagcaagaaaaggggtgattttcgtgtgttcaggtctcagagacca
agtgctagagaattgaatcttttgaagagaaaggcgaaggttaattctggtgatgttcgg
tctggggtgaatgctgggatgcagaaagcgatagcacccccttcaagtggtggtggtggt
ggttcggatttagggaaaggattagtggattctgcgacggatgaggatggtgtggagcat
gagggagatggacattggccgtttcatggctttgttgaacagcttcttgttgatatgttt
gatcctatttgggaggttcgtcatgggagtattatggctttgagggaaattttgacatat
cagggttcgtatgctggtgtatcgatgactgattcgagctcccacagtggtggtcatgta
ttggggagtgtgagtgagaaggctaatttatctgtgaagagagacagaggaattgacttg
aatttggatgttcaggaggataggtgtatagagggttcaaaaagggtgaaggttgaagtt
acacaaccagttactgtgcaaataggttgtaaggtggagcaaaatggagaaactggttcc
agccagtttgtgccagaagctaatatcggctctgtaataatgaattctgaatctgatgtt
ttacaggcgaagagtttgactgaaggaggtggttcacctctgataggttcagttgatgtt
acggagaagaagggttttgctgggaaggttgatgtggttgagaatcttggtagaaaccct
gatctcatgaacttggctggatcagttagaaattcgtggcttagaaattgtgagtttctg
caagactgtgctatctgcttcctatgtgtactgtcactggatcgttttggagattatgtc
tcagaccaagttgttgctccggtgagggaaacttgtgcgcaagcattaggtgctgtgctc
aagtacatggctcctgagttagtgcgtgaaactatgaacattttattgcaaatgcagatg
agacccgaatgggaaattcgtcatggcagcctgttaggtattaaatatcttattgctgtg
cggcaggagatgctatctgatttgcttgggtttgttctacctgcttgcaagtctggacta
gaggaccctgatgatgatgttcgagcagttgctgctgatgctcttatacccgctgcttct
actattgtttctaatatggatcagctgttgcatccaattgtaatgttattgtgggatatc
ttgcttgatcttgatgatcttagcccttccaccagtagtgtgatgaatcttctggcagaa
atttatactcatgcagggatgactggaaatatgctcgacactttgactctggggagttct
caggaacttgatctgaatgaagttctatcttttagagatgacgtagaggcaccagcacga
aaagaaaatccttatatgctatcagctcttgctccacggttatggccatttatgaggcat
actatcacatcagtccgttattcggccataagaacactagaaagactattagaagctcga
tatagaaaacacacatccgagccttctgctaattccttttggccttcctcaattttaggt
gatacacttcgaattgtcttccagaatctactgctggagtcaaatgatgatatattgctg
tgtagtgagagagtgtggagaatattgcttcattgtcctgtttcagatctagtagctgct
gctagatcccatatttcttcatggttggagttagcaactaccccttacggctctgaatta
gatatttcgaagatgttttggccagttgccccatcccaaaagagacgagttgctacggct
gcaaaaatgcgggctgtgaagatggacagttatggtggaagaactgttaatgtagctgct
ggcaaaggcatcatttcagttgacactggagatgctacctcactcaagatagttgttggt
gctgactcggaaagatcagtaacccgcacacgagtagtggtttcggcagctttgggaatt
cttgcgtcaaagtggcctgaatcgtctatataccatataactgatccattgtggaaagat
gttacatctttatctggcgtccagcgtcaaatttcggcaatgatcctgatttcctggttt
aaggaaatgaaaaatgttgaagtacctgctgcgcaggttattaattctgctctttttgaa
cagttcaaaaaatggttgttggatttgttaacctgcactgatccttctttgccgacaaaa
gattcgcctttgccttatgctgagctctcaagaacatactccaaaatgcgcggtgaagcc
ggtcatttgttccaccttgttggatcatgtggattgtctaaggatcttttgttgacaact
aacattgacctggaaaacttgagcatagatgatgctgtagactttgcttcaaaagttatg
ctgcctaattatgacttctctgtggagagttctgcagaaaaccatgtaatagatgatgtt
gagtcttcgagacaacgactactgacaactactggctatctgaaatgtgtgcaaagcaat
ttgcatgttactgtttcgtctttgatggctgctgcaattgtatggatttcagatcttcct
gcaaggcttaatccaattattctacccttgatggcttcacttaaaagagaacaagaagaa
atattgcaactgaaggctgctgaggctcttgctgagttgattgatgtttgtattgctcgt
aaacctggtccgaatgaaaagctcatcaagaacctttgtagtctaacctgcatggatcct
tctgagacgcctcaagcaggattgataacatctatggaagttattgacgagcaggatctc
cttttatgtcgaagcatgagttcaaatcagagatccaggggtcgtccagcagctactgga
gaagacaggtcgaaaactgaaggtttcattagcaggcgaggagctgaacttgccctgaag
catttgtgtaaaaaatttggtgctttgttgtttgacaaaatccccaagttatgggattgt
ctgtcagaagttctaaagcctattgatctgcaagcggaagttgcagctgaagagcagaag
attacagtagcaattgaatctgtaaaggatcctcagcttttaattaataatatacaggtg
gtacgctcagttgcccctctgttagatgatgcattgaagccaaaactgcttattctcctc
ccatgcatatttagatgtgttcgccactcccacgttgctgttagattggctgcttccagg
tgtattactacaatggcaaagtcgatgatagtgagtgtgatggcatctgtggttgagaat
gctgttcctatgttaggtgatccggcgtctgttcctgctagacaaggagcaggtatgctt
attggtcgactcgtccaaggattgggggtggaactggtcccatatgctccattgttagtt
gttcctcttcttaggtgcatgagtgattctgatgcttcagtaaggcagagtgtgacacgg
agttttgctgcattggtgcctcttctccctctggctcggggtcttcctcctcctgctgga
atcaatgatagcttattacgagacaaagaggatgcaaaattcttagagcagcttcttgat
aactccagtattgatgactacaaactttgcaccgagttaaaagttacccttaggagatac
cagcaggagggcgttaattggttagcgttcctaagacgattcaagttgcatggcatttta
tgtgatgatatggggcttggaaaaacgcttcaagcctctgcgatcgttgcatcagatatt
gctgaatatcgtaccataaacaatggtaaagagccttctccttcattaattgtttgccct
tcaactcttgtcggtcattgggcatatgagatagaaaagtttattgatccttctgttgct
agtactcttcaatacgttggctctgcggaggaacgtatcgccattagaagttacttcaac
aagcataatgtcattataacatcatatgatgttgtgcgtaaagatgttgatttccttggg
cagcttcgatggaactactgtgttttggatgaggggcatataattaaaaatgcgagatct
aaaattaccactgctgtgaaacagttgaaagcacagaaccggcttattctcagtggaact
ccaatccaaaataacatattggatttatggtctctttttgattttttgatgcctggtttt
cttggatctgagagacaatttcaagctacatatggaaagcctttgttagcagcaagagat
cctaaatgttcggctaaagatgcagaagcaggtgcattggctatggaagcactgcacaag
caggtgatgcccttcttgcttcgacgaacaaaagatgaggttctatctgatctcccggaa
aaaatcatccaggacagatattgtgatctgagccctgttcagttgaagctatatgagcag
ttttcaggttcccatgcaaaaaaggaaatatcaagtattgtcgggttggatgactccaaa
gagacaaaagacgaaaaggttgcacctaaagcatcatcacatatcttccaggctcttcag
tacctgctcaaactttgcagtcatccactgctagtagttagtgatgaagctgttgattcg
ctggggcatatcttgtcagatatccttccaaatcctgacatcttgtctgaacttcataaa
cttcaccactctcctaaactgatagctcttcaggagatcttggaagagtgtggtattggt
gtggatacatcaaattctgaaagcatgataaatgttggtcagcacagagttttgatattt
gcccagcacaaggctttgttggacataattgaaagagacctgttccgtgcccatatgagg
aacgtggcgtacttgcgactggatggatctgttcacacagaaaaacgatttgatattgtt
aaagcctttaattctgatcctaccattgatgtattgctacttacaactcatgttggcggc
cttggtttgaatttgacgtcagcggacactcttgtttttatggagcatgattggaatccc
atgagagatctccaggcaatggatagagcacacaggcttggtcaaaagaaagtagtgaat
gtccatcgtctcatcatgcgaggaactctagaggagaaagttatgagccttcagaaattt
aaagtatcagttgcaaattctgttatcaatgcggacaatgctagcttgaaaactatgaac
acagatcagctccttgaccttttcacaccagctgaaaactccagaaagggaggctttaaa
ttgaagagctctgatggcagttcaaatgaaaataagccatctggaagtggcaaaggtttg
aaagccattcttaatggtctggaagagctctgggatcaatcacaatatactgaagaatat
aatcttgaccactttctatcgaagctcaacagttga
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integrated database retrieval system
