KEGG   Amaranthus tricolor (tampala): 130823576
Entry
130823576         CDS       T09367                                 
Name
(RefSeq) splicing factor U2af large subunit B-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130823576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atri03041]
    130823576
Spliceosome [BR:atri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130823576
 Complex B
    130823576
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 130823576
NCBI-ProteinID: XP_057544212
LinkDB
Position
9:complement(29547390..29557293)
AA seq 526 aa
MSSDHAKSSPRRGSDDRSSRSTYKSRELDREMPRTRERDYHRERDRGDDRDGHHRNDRDR
SNRDDRDRNSRDERRRDYGGRDYGRSHDRDRRHRGRSRSPSPSRSRSKRTSGFDMAPPTG
SSVSSVSAQSLQDQLPGVPQPVTGHAHSMFTGGPSQLGHLSLMPAQFMTQQATRHARRVY
VGGLPPSANEQTIATFFSQIMTTVGGNAAGPGDAVVNVYINHEKKFAFVEMRSVEEASNA
MALDGISFEGVSVRVKRPTDYNPALAAALGPSLPNPSLNLAAVGLVPGAVSGTEGPDRIF
VGGIPYYFNEEQMRELLQSFGPLKAFDLVKDRDTGNSKGYGFCVYQDPSVTDIACDALNG
LKMGDKTLTVRRAAVSNGQAKLEHENLLAHAQQHVAMQKMALDASGFNLLGATIPTMETT
EIPTKILCLNQVVTVDELRNDNEYEEILEDMREECGKFGSLLSVVIPRPNMEGNLVPGVG
KVFLEYVDTAACSAAKKMLGGRKFGGNTVTADYYPEDKFYDADYNG
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgagtagcgatcatgcgaaatcctcacctcgacgaggttctgacgatcgaagctctcgt
tcgacgtataagtcacgagagctagaccgtgaaatgccgaggactagagaacgtgattat
caccgagaaagggataggggagatgaccgtgatggtcaccataggaatgacagagataga
agcaacagagatgatagagatagaaacagcagagatgaacgacgaagagattatggtggg
cgcgattatggaaggtctcatgatagggatagaagacatagaggtagatcacgttctccc
tcaccatctcgttcgaggagcaagcgaactagtggctttgatatggcgccacctacaggc
agctcagtttcgagtgtttcagctcaaagtttacaagatcaattaccaggggtgccgcag
ccagtgacaggacatgcacatagtatgtttactggagggccaagtcagttgggacatctc
tctttgatgccagcacaatttatgactcaacaggctactaggcatgctcgccgagtctat
gttggtgggcttcctccttcggccaatgagcagacaattgctacattcttcagccaaatt
atgacaacagttggtggaaatgctgctggtcctggagatgcagttgtcaatgtgtacatc
aatcatgaaaaaaaatttgcttttgtagaaatgaggtctgttgaagaagcatctaatgca
atggccttggatggaatttctttcgagggggtttccgtgagggtgaagagacccacggat
tataatccagcattagctgcagctcttggcccaagcctaccaaatcccagtttaaatcta
gctgctgtcggccttgttcccggtgctgtttctgggacagaaggtcctgaccgtattttt
gttggtggaataccttactattttaatgaagagcagatgcgagagctgctgcaatcattt
ggaccattgaaggcatttgaccttgtgaaggatagagacactgggaattccaaaggctat
ggtttttgtgtttatcaggatccatcagtgactgatattgcctgtgatgccctcaatggc
ttgaaaatgggcgataaaactttaactgttagaagagctgccgtcagcaatggccaggca
aaattagagcatgaaaatcttttggctcatgcgcaacaacatgtagctatgcagaaaatg
gctttagatgctagtggtttcaatcttcttggagctacgataccgactatggaaactaca
gaaatccctactaaaattctttgcttgaatcaggtggtaactgttgatgaactgagaaat
gataatgaatacgaagaaatcttagaagatatgagggaggaatgcggaaaatttggatcc
ttgttgagtgttgttattccgcgacccaatatggaggggaacctggttcctggtgttggg
aaggtattcctggagtatgttgatacagctgcctgttctgctgccaaaaagatgcttggg
ggccggaaattcgggggaaatactgtcactgctgattactatccagaagacaaattctat
gatgctgattacaacgggtaa

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