Amaranthus tricolor (tampala): 130823618
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Entry
130823618 CDS
T09367
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130823618
03012 Translation factors [BR:
atri03012
]
130823618
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130823618
mRNA cycle factors
Stress granule specific factors
130823618
Translation factors [BR:
atri03012
]
Eukaryotic type
Initiation factors
eIF-4
130823618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
Ntox8
Motif
Other DBs
NCBI-GeneID:
130823618
NCBI-ProteinID:
XP_057544283
LinkDB
All DBs
Position
9:complement(27609743..27618731)
Genome browser
AA seq
1763 aa
AA seq
DB search
MSLNQSRFDKNELQFRKPGCGRSGSGSGSGGQQRPFFGGRGRGGAGATSTATDPYVSSNR
SYKKVVNPQSGQPGGNAGPTNTSNFNAATGFQSAEKSTLRAVSNAPTPSIIPKSADTSSQ
KPSQPVLKAPSLQSSSMSSDSAMPSTPSKGDGSKDFPLQFGSVSPSLMTGMQVPARTSSA
PPNLDEQKRNQLQARRDASRPAPEIPLPSAPKQDLPRKDVSVTEHPIAQETYIKSKKNVQ
VTFVSPTRAHKPSTLPTPGLSVPLPSHQQNVSLQFGGPNRQIQSQGMTPASLQRPIQMGN
PSQVPQPVFVSAVQHPLMQTQGIMHHGQNPAFHSQLTPQHPHQSGNVGINISTQYNQQKA
GKYDSARKTVKITHPETHEELRLDSRDGGLTASRGHQNGPSQSQPVSAYTGVHPMGYYSN
SYPTGLPFFPAQSSHTLTSAQLNASPQAPRFNYSVSQTPPTMPFMNPSVSNTYSVPRVGA
SLHGTADSSNLDHVRDAQTVVPSSQSSSDPVIVKTAAGEVIKFNAASIPSQNSSPVAPAV
PGLIPRESSAIMQVNIAKKETVTKSVSVRDVDKQLGKKGHAEPPLQVVGEQCDSGVSQDL
AGSSKAMVNESTDTKSSILSVSKVVTSEAVQTSPLIASAVFSGVDGVNIGAESTSNSSEN
SKTDNGADKAVKELNAKQNDLPLLEKTTNESTDANVREENEPREPPSDNSTTAFNTANES
DQDLQLKKVGHVKGLPDASKRGAEFRDFCIEADKMNTESSLLLDDSSAISDGCSISDFST
LSGATDVISSKGNNVSKSGMSAYEATSVFANITDPRLRNEGEVVDIPRPSSSSGTLSGSS
KTSMESNKLNRGKKKRKELLQKADAQGITADLYMAYKGPEEKKEIGVATESNCVANTKEA
SGDIKSEESTGRDTNEQSKAELDDWEDAAEIPTPKLESSVMGYSGGSVHDEDGVAIKMYS
RDFLLTFLVQCTDLPEGFEITSDIADVLMSEKVNVSRSSGRIIDRPTGAARIDRRGSGMM
DADRWNKQPGPVRDSGIDLAYASNIMGFRAGPGPNYGVLKSPRMHGPVPQAGGILSGPMH
STGYQGLQRNNSDADRWQRATNFNRGLISAPQGPSQVMHRAENKYEIGKISDEEEAKQRK
LKGILNKLTPQNFEKLFEQVKEVNIDNAVTLTGVISQIFDKALMEPTFCEMYANFCQCLA
SGLPELSVDNEKITFRRLLLNKCQEEFEREEREEQANKADNEGEDETKQFDEVREEMRLK
ARRRMLGNIRLIGELFKKKMLTERIMHECIKKLLGPNQNPDEENIEALCKLMSTIGEMID
HPKAKEHMDAYFDIMGQLSNNMKLSSRLRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHR
DAAQERQGQVSRLSRGPSMNSAMRRGKPVEFALRGTMLTSLIGQGGGFRGMPSQVHGFGG
QDGRIDEKSIFGTRTLSMPLPPRQSGDEAIFLGPQGGLARGTVYRAQPSPSSSSPLLDHA
PSYVDSSRTPGGYNGYNNVPAHGVYSAREDHFARNANREARYPDRNSDLARPITPPVPRA
APDQIIASEGELPEESLRNKSVAAIREYYSAKDQKEVAQCIRDLNAPRFYPTVISIWVTD
SFERKDLERDMLSKLLVDLTRAREGIFTPAQLVEGFKSVLTELEETVTDAPKAPEFLGQI
FARTVIENVITLKDVGRLVHDGGVDGSLLEAGLAGDIIGSVLEMIKSEQGESVLNEIRAS
SNLRLEDFRPPEPIRSRKLEMFI
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaatcagtcaaggtttgataagaacgagttacagtttagaaaaccaggttgt
ggacgatctggttctggctctggctctggtggtcagcaaagacctttttttggtggtcgt
gggcgaggtggtgctggcgccacatccactgccaccgacccttatgtttcttctaatcga
agttataagaaggttgttaatcctcaaagtggtcagcctggaggaaatgcaggaccaacc
aatacttcaaattttaatgctgctactggttttcaatctgcggagaaatcaacattacgt
gcagtttcgaatgctccaactccatctatcatccccaagtcagctgatacatcatctcaa
aaacccagccagccagttctaaaggccccttctttgcagtcttcctccatgagttcagat
tctgcaatgccctctaccccatcaaagggtgatggatctaaggattttcctctgcaattt
ggatccgtaagtccaagtttaatgactggcatgcaggtacctgctcgtacgagctcagct
ccacctaatttggatgagcaaaagcgtaatcagttgcaggctcgacgtgatgcttcgagg
cctgctccggaaattccattaccatctgctcccaagcaggatttgccaagaaaggatgtt
tctgttaccgagcatcctattgcgcaggagacttatattaagtccaaaaaaaatgtgcaa
gtgacatttgtatctccaacacgagcacataaaccttctacccttcccacaccgggacta
tctgttccgttaccctcccatcagcaaaatgtttccttgcagtttggtggacctaatcgt
caaattcagtctcaaggcatgactcctgcttcgcttcaaaggccaatacagatgggaaat
ccttcccaagttcctcaaccggtttttgtgtctgctgtccaacatccgcttatgcaaact
cagggaattatgcatcacggtcagaatccggctttccactctcagcttacaccacagcat
ccacatcaatcagggaatgttggaataaatatatctactcagtataatcaacagaaggct
ggaaaatatgacagtgcacgtaagacagtgaagataactcatccggaaacacatgaggaa
ttaagactagatagtagagatggtggattaactgcatcacgagggcatcaaaatgggccc
tcacagtcccaaccagtatctgcttacactggagtacatcccatgggctactattctaac
tcttatccaactggtcttccattttttcctgcccaatcttcgcatactttgacaagtgca
cagttaaatgctagccctcaggcgcccaggtttaactattccgtaagtcagacaccccct
actatgccatttatgaacccatctgtgtctaatacctattccgttcccagagttggggct
tcattgcatggcactgctgactcttccaatttggatcatgttagagatgctcagacagtg
gttccttcatctcaatcttcttcagaccctgtgattgtgaaaacagctgctggggaggtc
ataaagttcaatgctgcttccattccatcacagaattcaagtccagtagcacctgctgtt
cctggcttgattcccagagagtcatcagctattatgcaagtgaatattgcaaagaaggaa
actgtaactaagtctgtgtccgtcagggatgttgacaagcaattgggcaaaaaaggacat
gctgaaccaccactccaggttgttggggagcaatgtgattccggagtgtctcaggacctt
gctggttcttcaaaggctatggtcaatgaatccacagacactaaaagctctatattatca
gtctctaaggtcgttacatcagaagctgtccaaacatcccctctaattgcttctgcagta
tttagtggtgttgatggtgttaatattggtgctgaaagcacatctaattcatctgaaaat
tccaaaaccgataatggtgcggataaagcagttaaagagctgaatgcaaaacaaaatgat
cttcctttgcttgagaaaaccaccaatgagtctacggatgccaatgtaagagaggaaaat
gaaccgagagagcctccttcagataattctacaactgctttcaacactgccaatgagagc
gatcaggatctccaattgaaaaaagttggtcatgtgaaaggtttacctgatgcttcaaag
agaggggctgaatttagagatttttgtattgaagctgataaaatgaacacagaaagctct
ttgcttcttgatgattcatctgctatttctgatggttgtagcatctcagatttcagtacg
ttgtctggggcaacagatgtcatcagttccaaaggtaacaatgtttcaaaatctggtatg
tcagcctatgaggctacctctgtttttgcaaatattactgatccacgtttacggaatgaa
ggtgaagtcgtggatatcccaaggccaagttcttcatcaggtactttgtcaggctccagt
aaaacttctatggaatcaaataagttgaatcgaggcaagaagaagcggaaggaattgctt
cagaaggcagatgctcaggggataactgctgatctttacatggcttataagggacctgag
gaaaagaaagaaattggtgttgccacagaaagcaactgtgtagctaacacaaaagaggca
tctggtgatattaaatcggaagagagtactggtagggacacaaatgagcagagtaaagct
gagcttgatgattgggaagatgctgctgaaattcctactccaaaattggagtcctcagtt
atgggttatagtggaggctcagttcatgatgaagatggggttgcaatcaaaatgtattct
agagatttcctccttacatttttagtacaatgtactgatctcccagaagggtttgaaatt
acttctgatatagctgatgtattaatgtctgaaaaagttaatgtttctcgtagctctgga
agaatcatagataggccaacaggagccgcccgaattgatcggcgagggagtgggatgatg
gatgctgacaggtggaataaacagccaggtccggttagggattctgggatagatcttgct
tatgcaagcaatatcatgggttttcgtgctggtccagggcctaattatggggtgctcaag
agcccacggatgcatggtccagttccacaagctggagggattctgtctggtccgatgcat
tccacgggttatcagggattgcaaagaaataactctgatgctgatcgttggcagagagct
acaaattttaatagaggtttaatttctgctccacagggtccttcccaagtgatgcacaga
gctgagaacaagtacgagattggtaaaatatctgatgaagaagaagcgaaacagaggaag
ttgaagggtatactgaataagctgactccacagaactttgagaagttgtttgagcaagtt
aaagaagtcaatattgacaatgctgtgactctgactggagtaatctctcagatctttgac
aaggctttaatggagccaacattttgtgaaatgtatgcgaatttctgccagtgtcttgca
tctgggttgccagaattaagtgttgacaacgagaagatcaccttcaggcgattgttgctg
aacaagtgtcaagaagaatttgagagggaagaaagagaagaacaagcgaataaggctgat
aatgaaggtgaagatgagactaagcaattcgatgaggtaagagaagagatgagactcaaa
gctaggagacgtatgttgggaaatataagattaattggcgagttgttcaaaaagaagatg
ttgactgaaagaataatgcacgagtgtataaagaagctgctaggtccaaatcaaaatcca
gatgaggagaatatcgaggcattatgcaaattaatgagcacaattggtgagatgattgat
catcccaaagccaaagagcatatggatgcctattttgacatcatgggtcagttgtccaac
aacatgaagctgtcttctagattgaggttcatgttgaaggacgctattgatttaaggaag
aataaatggcaacagagaaggaaagttgaaggtcctaagaagatagaggaagtgcatcgt
gatgctgcccaagaaaggcaaggacaagtaagtcgtttgagtcgtggtcccagcatgaat
tctgcaatgagaaggggcaaacctgtggagtttgctcttcggggaactatgctaacttct
ctgattgggcagggtggtggtttcagaggtatgccctcacaggttcatgggtttggggga
caggatgggcggatagatgagaaaagcatctttggaactcgtaccctttccatgccattg
cccccaaggcagtcaggtgatgaagcaatatttttgggaccccaaggggggcttgctagg
gggacagtatatagagcgcagccatcgccgtcgtcaagttcgcctttattggaccatgct
ccatcctatgttgattctagcaggacgccaggtggttacaatggttacaataatgtgcca
gcgcatggtgtgtatagcgccagggaagatcactttgctaggaatgcaaatagggaggcc
agataccctgatcgaaattcagacttggcaaggccaataactccacctgtgccgcgggct
gctccagatcaaattattgcttcggaaggtgaattgcctgaggagagcttacggaataag
tctgttgcagctataagagagtactacagtgccaaagatcagaaagaagttgcacaatgc
atcagagacttaaatgcgccaagattttatcctactgtcatatctatttgggtaaccgac
tcttttgagaggaaagacttggagcgggatatgctttctaagctacttgttgatctcacg
agagctcgggaaggcatatttacccctgctcagcttgttgaagggtttaaatcagtattg
actgagttggaagagactgttactgatgccccaaaagcaccagaattcctcggccagata
tttgcccgaacagtgattgaaaatgtaataaccttgaaagatgttggtcggttagtacat
gatggcggggttgatggtagtcttctagaagcggggttggcaggtgacattatcggcagt
gtgctagaaatgattaaatctgagcaaggagaatctgtactgaatgagattcgagctagc
tccaatctgcggttagaggattttcgacctccagagccgattaggtcccgtaaattagag
atgtttatttag
DBGET
integrated database retrieval system
