Amaranthus tricolor (tampala): 130823818
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Entry
130823818 CDS
T09367
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130823818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130823818
03029 Mitochondrial biogenesis [BR:
atri03029
]
130823818
Membrane trafficking [BR:
atri04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130823818
Atg1 complex
130823818
Mitochondrial biogenesis [BR:
atri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130823818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130823818
NCBI-ProteinID:
XP_057544591
LinkDB
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Position
9:complement(641249..649541)
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AA seq
625 aa
AA seq
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MASSRGNVQSDTAKKEQIITEFFTKTLQIILESRSPYVSSRNYSGEQALSSPSSSSSSPS
SFRTRDKWFNLGLRECPAALENIDFWRQSNLEPMVVDVILVQRSIDWDPLSFSPQRDFVK
NPTLKEQVSNFMNLELEEFGVEPKNEKIIERWVVHYESRTSRDGGQGSKKSSGNLHSLYK
KSIVLLRSLYVTIRLLPAYKLFRDLISSGQIRTYSLTHRVSSFVEPFTRREEADMQRFNF
SPIDTACGRLCLSVSYRSVLSDVSSEPSTPMSPQVIPDYVGSPLANPLKRFPSLPRSHGS
PSCSPFARRHSWSYENYRASSPSNFPSPSPTYSDSHSSVSKCRSHLPPPLSLPQHLPDAF
QASSRNLGYDEYWPSPVFSPSSSPSPPMYIAGTDASKYLSRCESAPVRIPTSKAFNKQTL
PPSPPPKLTRAATLKSDRSTCRSGSSTEKFSLGRDESGRYSGARLSTNSSPGISVSMSSS
RPSFHDDFDDAEFTCPFVVDDDDLIGNRPESFYKKGQPNDLQEHGGSGPVRKSQDAAVGA
VVLMLKKAPPLRQDSQGRNNEQSLLKSDDQQSQKAAGTSLLSSSLTPSKTTADALEELRG
YKDLRDFLLIQGNKSRMKGSSSEES
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtctcgtggtaatgttcaatctgatactgcaaaaaaggagcaaattataact
gagtttttcactaagacccttcagattatactagaatctaggtcaccctatgtgtcatca
cgaaattatagtggagagcaggctctatcatctccatcatcgtcatcttcatctccttca
agctttaggactagggataagtggttcaatttaggtctcagggaatgccctgctgctttg
gaaaatatagatttttggcgtcaaagtaatctcgaaccaatggtagtcgacgttatattg
gttcaacgctcgatagattgggatcctttgagtttttctccacaaagggattttgtaaaa
aaccctacattgaaagagcaggtttcgaattttatgaacttggaacttgaagagtttggt
gttgaaccaaagaatgaaaagattatagaaagatgggtggtacactatgagagccgtacg
agtagagatggtggccaagggagtaaaaaatccagtggtaatttgcactcactatataag
aagtcaatagtgcttttgagatcgttgtatgtaactataagacttttgcctgcgtacaaa
ctcttcagagatctcatatcctctggacaaattcggacatactcacttacacatcgtgtt
tcatcttttgttgagcccttcacgaggcgagaagaggctgatatgcagagatttaatttt
tctcctattgataccgcctgtggtagactttgtctttcagtatcatatcgatctgtactt
tcggatgtcagctcagagccatcaactcctatgtctccacaggttataccagattatgtt
gggagcccattagcgaatccacttaaaaggttcccctctcttccacggtctcatggctca
ccatcatgctctccatttgctagacgtcatagctggagctatgaaaactatcgggcctca
tcgccgtctaattttccatctccatcgcccacgtactcggactctcattcttcagtatct
aagtgtaggtctcatcttcccccacctttgagcttgcctcagcatttacctgatgccttt
caagcttctagcagaaatcttgggtatgatgaatattggccttcccctgtcttttcaccc
tcctcatccccttctccaccaatgtacattgctggaactgatgcatcaaagtatttatcg
agatgtgaaagtgctcctgtgcgcattcctactagtaaggctttcaacaagcaaactttg
ccaccttctcctccccctaagcttacaagagctgccactttgaaatcggataggtctaca
tgtcgaagtggctcatcaactgagaagttttctctggggagagatgaaagcggaagatat
tccggggccagattatcaacaaacagctcaccaggcatctctgtttctatgagttctagt
aggccatcgtttcatgatgattttgatgatgctgagttcacttgcccatttgttgtggat
gatgatgacttgataggtaacaggcctgaatccttctataagaaagggcaaccaaatgac
ctacaagaacatggaggatccggccctgttagaaaatcccaagacgctgcggttggtgct
gtggtgctgatgctgaaaaaggctccacctcttcggcaggattcacagggccgcaacaat
gaacaatctcttctaaaatcggatgatcagcaatctcagaaggcggctggcactagccta
ttatcgtcaagccttacaccgtcgaaaacaaccgctgatgctttggaagagcttcgggga
tataaagacttgagggactttttgcttattcaagggaacaagtcgcgtatgaaaggatct
tcgagtgaagaatcctag
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