Amaranthus tricolor (tampala): 130823845
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Entry
130823845 CDS
T09367
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atri03009
]
130823845
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130823845
Ribosome biogenesis [BR:
atri03009
]
Eukaryotic type
Pre-60S particles
Helicases
130823845
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
130823845
NCBI-ProteinID:
XP_057544633
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All DBs
Position
9:26090079..26104105
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AA seq
519 aa
AA seq
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MNKTPHVQNSIPVLPWLRHPVDIIDFKETPVDLLPDLDPRLVKALKDVSISSLFPVQVAV
WQETIGPGAFERDLCVNSPTGSGKTLAYALPLVQMLASHTVKCLRALVVLPTRDLAVQVK
KVFDDIAPAAGLSVGLAVGQSSISDEISTLITTPKLEAGFCYDPEDYTANSSKSAVDILV
ATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLGEAYQAWLPTVLHSARSNGEVFVHSVE
ALSPSICGSFKTIRRFGVERGFKDKAYPRLVKMLFSATLTRNPSKLGLLDLHHPLFLTTG
QSRYAFPEKLEFFKVLCESHDKALYLVALLQKLRGEKCIVFTSSKKMTHRLCSLLKSFGV
LQMKVKGYSSCQHQAVRSKILDAFRRGEVEVVVSSDNLSRGTDVEAVANVIIYDVPRYIK
AYLHRAGRTARAFQIGRCFTLLLKDEVKKFKALQRKAEISAALFPLPTESIQSLQSDYLS
ALDKLKESVEFEASRKRKFNFKHSRPAKGKAKAVKVSKD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacaccccatgttcaaaacagcataccagtgctgccatggttgaggcatcca
gttgatattattgactttaaggagacccccgtagatctccttcccgatcttgatcctagg
ctagtgaaggctttgaaggatgtctctatctcttcactattccctgtacaagttgcagtt
tggcaagagacaattggtccgggtgcttttgaacgtgatttatgtgtaaattcacctact
ggaagtgggaaaacattggcttatgctctgccgctagtgcaaatgctagctagtcacacc
gtgaaatgtttgcgtgccttggtggtgttgcccactcgtgatttagctgtgcaggtcaaa
aaagtttttgatgatattgcacctgctgctggcttgtctgttggtctggctgttggacag
tcttcaatttcggatgaaatttcaacactaatcacaacgcctaaacttgaggctggcttc
tgttatgaccctgaagattacactgcaaacagctcaaaaagtgctgtggacatactggta
gcaactcctggaaggcttatggatcatattaatactacaaaaggcttcacactagagcat
ctacggtatcttgtagttgatgagactgatcggttattgggagaggcctaccaggcttgg
ttacccactgttctccattcagctcgttcaaatggtgaggtgtttgtacatagcgttgaa
gccttatctccatcaatttgtggttccttcaagaccattcggagatttggagttgaaagg
ggctttaaggataaagcttatcccaggctagtcaaaatgctcttttctgctacgttgact
cgaaaccctagcaaacttggtctacttgatcttcatcatccattgtttttgacaactggc
caatcacgctatgcttttccagaaaagctagagtttttcaaagtgctttgtgaatcacat
gataaagccctgtacttagttgcccttcttcaaaagttgagaggcgagaaatgcattgtc
tttacatcatctaaaaagatgacccataggctatgcagcttgctgaaatcttttggtgtt
cttcaaatgaaggttaagggatactcaagctgtcaacaccaggctgtcagaagcaagata
ctcgatgcattccggagaggagaagtagaagtggttgtttcttcagataacctttctcga
ggaacagatgttgaagcagtagcaaatgtcattatttatgatgtacctcgctacatcaaa
gcatatcttcatcgtgctggaaggacagctagagcatttcaaatcgggcgatgctttaca
ttgctgcttaaagatgaagtgaagaaattcaaggcacttcaacgaaaagcagaaatcagt
gctgcactcttccctcttccaaccgagtcaattcagtctctgcagtccgactacttgtct
gcgttggataagttgaaagagagtgtagaatttgaagcctctagaaaacgcaagttcaac
ttcaagcattcaagaccagccaaaggcaaagcaaaggcagtgaaagtgtctaaggactaa
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